Gene Tery_4992 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_4992 
Symbol 
ID4246647 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp7633432 
End bp7634532 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content34% 
IMG OID638109803 
ProductRieske (2Fe-2S) region 
Protein accessionYP_724379 
Protein GI113478318 
COG category[P] Inorganic ion transport and metabolism
[R] General function prediction only 
COG ID[COG4638] Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTCAAA GAAATCAAAA AATCAAGAAT CTACAAACTA ATAGTTGCGA TCGCTCATCC 
TCATTTGACC TCAGAAAAAT TGGTTTAAAC CCGAACTTTT GGTATCCTCT AGCCCAATCA
AAAGAACTAA AAAAAGAAAA ACCTCATCAA GTTAGTTTTG GAGGAGAACC CATTGTTTTA
GTAAGAACAA AATCCAACCA AATATTCGCC CTAGAAGACC GCTGTGCCCA CCGACAAATT
CCCCTAAGTA TGGGAGTAGT TTGTGGAGAA AAAATCACCT GTACTTATCA TGGATGGCAA
TATGATCAGA CAGGAAAAAT CGCAAAAGTT TCCTATCTAC CAAAAAATTG CTCCTTACCA
AAAGGAGTAA AAAGCTATCC TTGCAAAGAA GCCTATAACC ATATTTTTGT ATTTCCTGGA
AAAGTAGAAT TAGCTGAAAC CGTACCATTT CCAGAAATTA AAAATTGGTC TAATAATGAA
TATAAAACAA TGTACTTTTC CCGTCGTGTA AACTGTCATT ATTCATTTAT GAAAGAAAAT
TTAATGGATA TGAACCATCA ATTTTTACAT CGAAAGTTTA TGGGAAAAGT AAAACCAACA
ATCATAGAAA ATTCTCAAGG AGAAAATTGG GTAGAAGCCA AATATAAATT CAGTGGGGAA
CCTCATCCAA GTGCCAACTT AGTATTAGCA GCCGGACGAA AAGAAGACTC ATCCTCAGAA
GATTTAGACT TTGATATTAT GACAATTCGC ACAGAATATC CCTATCAAAC CTTAAAAGTT
TGCCCCCCAA ATTCAGAAAA CCCACTTTTA AACCTTTGGG TAGTTTATAT TCCAGTAGAT
CAAGAACAAA AAATTAATCA TAGCTTTGGA ATGTTGATGA TTCGTAAACC TAAAATTCCC
GGATTAATCA ATCTTCTCTG GCCATTAATG CGTTATTTTA CTCAGGTTAT TTTTACCGAA
GATAAACTAG CAGTAGAAAC CGAACAAAAA GCTTACGATA TTCAGGGAGA AGATAGAAAT
CAAGAAGTAT TTCCTTTGAT ACTTGATGTG CGAGAATTAT TGTACAAAAA AGGAGTTTCT
CTCTTTCCTA AAATCAAGTA A
 
Protein sequence
MLQRNQKIKN LQTNSCDRSS SFDLRKIGLN PNFWYPLAQS KELKKEKPHQ VSFGGEPIVL 
VRTKSNQIFA LEDRCAHRQI PLSMGVVCGE KITCTYHGWQ YDQTGKIAKV SYLPKNCSLP
KGVKSYPCKE AYNHIFVFPG KVELAETVPF PEIKNWSNNE YKTMYFSRRV NCHYSFMKEN
LMDMNHQFLH RKFMGKVKPT IIENSQGENW VEAKYKFSGE PHPSANLVLA AGRKEDSSSE
DLDFDIMTIR TEYPYQTLKV CPPNSENPLL NLWVVYIPVD QEQKINHSFG MLMIRKPKIP
GLINLLWPLM RYFTQVIFTE DKLAVETEQK AYDIQGEDRN QEVFPLILDV RELLYKKGVS
LFPKIK