| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_4990 |
|---|
| Symbol | |
|---|
| ID | 4246645 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Trichodesmium erythraeum IMS101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008312 |
|---|
| Strand | + |
|---|
| Start bp | 7630504 |
|---|
| End bp | 7631664 |
|---|
| Gene Length | 1161 bp |
|---|
| Protein Length | 386 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 638109801 |
|---|
| Product | radical SAM family protein |
|---|
| Protein accession | YP_724377 |
|---|
| Protein GI | 113478316 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0535] Predicted Fe-S oxidoreductases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.396764 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.819586 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAACAA ACACCCATAA AATACCCCCC CGTAACAATA CAAAAACTAC CACCCCAACC
AAAAATCGGG GAATGTCAAC CACAACCAGC ATCCTAGATA CCCTACAGCT AGTTTTTCAA
GCAGGAGGGC CAGGATTTTG TCAATTTGCC ATTAATAACG CTTGTAACGC CAACTGCGGT
TTCTGCAACT TTGCAAGAGA CACCTTTCCT AAAGAAAAAA CAAAATTTGT TAACCTTAAT
GAAGGATTAG ACTCAATTAA TATTCTATTT CGCGAAGGTA TCAGATATCT AGTTTTCACA
GGTGGAGAAC CAACCCTTAA CCCCAACTTA ATCTCATTTG TTGACCATGC AACAAGATTA
GGAATCAAAG TTATGGTAGT AACAAACGGT GGGTTATTAA CCCCCAAAAA AATTGAGGCA
TTAGCAGACG CAGGTTTATC TAGTCTAATC ATCTCAGTTG ATGCCGCCGC TCAAGACATC
CATGAAAAAA ATCGTGGGTT ACCTGGTGTC TGCAATAAAA TAAAAGAAGC AAATCAAATC
CTCAAAAATA TTGGTATGTA TTCCACCGCT TCCGTCACAA TGAGTCATTT AGTTGACTAT
GATGCATTGC CAGATTTTCT CACCTCCCTA GGATTTGAAT CAGTAGTTTT TTCCTATCCA
TTAACAAATC TTGATTCTAA CTTTTTAGGA TATTCTGATG CAGGTTTAGT CACTCATACC
AATGAAAGTC TCTGGCAAGC CTACGAAAAA GTCAAGCAAT TAAAAAAGCG ATTTCGTGTA
GTTAACCCCA CTCTTTCTTT AGAAGAAATG CAGAGATTCG TCAAAAATGA AGAACAGCGT
TATTCTTGTT TAGCAGGTTA TCGTTTCTTC TTTCTTGACT GGGAATTAAA CTTATGGCGT
TGTCATTTTT GGCATGAACC AATGTGTTCT ATTTATGAAT TTGATAGCTC CAAATTAGTC
AGAGATAATT GTACAAAATG TATGATTAAT TGTTATCGAG ATTCTAGTTT AATGCAGAAT
ATTGCCGTAT CAATGCAGGA TGCTTATCAG TCAATTAAGA AGGGAAATTT ATTAGATACA
GCAAAAGCTT TAACAAGAAA AAGTAATGTT GATTCCCTGC GAGCAGTGGT AGAAGAATTA
CCTTGGATAA TGCGTTTTTA A
|
|---|
| Protein sequence | MKTNTHKIPP RNNTKTTTPT KNRGMSTTTS ILDTLQLVFQ AGGPGFCQFA INNACNANCG
FCNFARDTFP KEKTKFVNLN EGLDSINILF REGIRYLVFT GGEPTLNPNL ISFVDHATRL
GIKVMVVTNG GLLTPKKIEA LADAGLSSLI ISVDAAAQDI HEKNRGLPGV CNKIKEANQI
LKNIGMYSTA SVTMSHLVDY DALPDFLTSL GFESVVFSYP LTNLDSNFLG YSDAGLVTHT
NESLWQAYEK VKQLKKRFRV VNPTLSLEEM QRFVKNEEQR YSCLAGYRFF FLDWELNLWR
CHFWHEPMCS IYEFDSSKLV RDNCTKCMIN CYRDSSLMQN IAVSMQDAYQ SIKKGNLLDT
AKALTRKSNV DSLRAVVEEL PWIMRF
|
|---|
| |