Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_4983 |
Symbol | |
ID | 4246638 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | - |
Start bp | 7613119 |
End bp | 7615794 |
Gene Length | 2676 bp |
Protein Length | 891 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 638109794 |
Product | WD-40 repeat-containing protein |
Protein accession | YP_724370 |
Protein GI | 113478309 |
COG category | [R] General function prediction only |
COG ID | [COG2319] FOG: WD40 repeat |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.709938 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACACTT CAAGGCAAAA ATCTTATTAT CAAGTTGGTG GTTGTCTTCC TATAAATGCA CCGAATTATG TTCAAAGACG AGCAGATGAA TACTTTTATG AAGGTCTGAA AGCAGGTGAG TTTTGTTATG TTCTTAATTC TCGTCAAATG GGAAAATCTA GTTTGCAAGT TAGAACAATT CAAAGATTAC AAAAACAAGG TATTTGTTGT GCAGCAATCG ACATTTCAGA AATAGGTAAT CGGGGAGTAA CCATCGAACA GTGGTATGCA GGTATTCTGC GGATATTAGA AAATAATTTT AATCTGTCAG AATATGTAAA TATTCGTACT TGGTGGCGAG AGCGAGATTA TCTTGCCCCC GTGCAAAGAT TAAGTGAATT TATTAACACT GTATTACTAA CAAAAATAAA TCAGAATATT GTAATTTTTA TTGATGAAAT TGATAGTATT CTAGCCCTAG ATTTTCCAGT CGATGATTTT TTAGGATTTA TTCGAGCTTG TTACAACAAA CGTGCTCATA ATAATGAATA TAATCGTCTA ACTTTTGCTT TGTTAGGAGT TAGTACACCT CAAGATTTAT GTCAGGATAA AAGTAGTACA CCTTTTAATA TTGGAAGAGC AATTGAATTA ACTGGCTTTC AATTAGATGA AGCTTTCTCA TTAATAGATG GACTAGTGGG AATTTGTCAG AAACCAGAAG CAGTTTTAAA AGAGGTTTTA CTTTGGACTG GAGGGCAACC ATTTTTAACT CAAAAAGTCT GTAAACTCTT AATTGAAAAT GGAGAGTTAA TTATTAACCC AGCGGAAGAA GTAGCAGGAA TTGTTAGGTC AAAAATTGTT CATAATTGGG AAGCACAAGA CATGCCAGAA CATTTAAAGA CTATTCGCAA CCGCATTTTA AGAAAGAATA AACGAATAGT CAGAAGATTA GGGTTATATC AAGAAATTTT ACAGAATAAC TTGACTGGAA TAATAGCAGA TAATAGTTCA GAACAAATGG AACTTAGGTT ATCTGGATTA GTAGTTAAAC GAGATAATAA GTTAATAGTT GCTAATCTAA TATATAGGAC TGTTTTTCAT GAAAATATGA TTCTTGAAGA ATTGGAAAAA TTACCTCCCT ATTCAGAAGA AATTAAAGCA TGGATTAATT CTAACTGTGC AGATAAATCA TATCTATTGC AAGGAAAACA TTTACAATCA GCTTTAGTTT GGGCAACAGG AAAAAGTTTA AGAAATCAAG ATTTCCAATT TTTGACTACT AGCCAAAAAT TAGTATTAGA TGCTCAGACA CAAGCTCTAG AATTAACAAA AATTGAAACT AAAAAAGCTC AAGCAGAAGT TGTAAAAGCA CAACAAAAAG CTCAACTTTG GATTCAAATA GGCTCCACTA TTTTTAGCAT ATCTTTGATT TTATCCATAG GTTTTTCTAT ATTAGCCTAT CAAAAATTTA AACTAGCACA ATCTAGTCAT GAAATTGAAC AAATTGGCAC TGACGCTTTA TTATTAGCTA TCGAAAAGTC AGCAACAAAT CAGGAATTAT TAGAAGCTTT ACCCAAAGCT ATATCTGCAG GAAAAAGATT AAAATCTTTA GTAAATAACA ATACTCCTCT AGCAGAATAT CCTGGGACTC GACCAATATT AGCTTTACAA ATGATTCTTG ATAAACTTGA CGAACAAGAA CAATTTCAAG ATAGTATACT TCAGAAAAGA AAAATTATTT TGCAAGGGCA TAATGGTGCA GTTACCAGTG TAAAATTTAG TCCAAATCAA GAATTTTTAG CTTCAGCAGG AGTAGATGGA AAAGTAATTA TTTGGAATCT GGAAGGCAAA AAAATTACAG AATGGGAAAC AGAACAAAAA TCAATTAATA GTCTAATTTT TCATCCTGAT AATAAATATT TAGCAACTGC TGGTAGTAAC GGCACAGTAA AAATATGGAG TCTATTAAAG AAAAATTTAG GGATAAAATT ATATGTATTA GAAATATCTC AAACTGAAGT TAATAGTATT AGTTTTAGTG CTAATGGTAA GTATTTAGCA ACTGCTGGCA TAAATATTCC TGTACAAATT TGGAACTTAT CATCGCTGCC GATAAATATA TCATCTGATC AAGTTTTGGA TGATCATGGT TTAATTAGAA ACATTCATTT TAGCCCTAAT GATAATTTTC TAGCTACATT AGATGGGAAA TCTACTATTA GATTATGGAA TTTATCTGAA AATAAATTTA AAATCCTAGA TGTAGAAGCT ATTAGTATGA ATTTTAGCAT TAATAAACCT CAGATATTAC TAACAGCAAC GTCAAATGGA ATAGTAGAAA TGTGGCAGAC TTATACTGGG AGATTAGTCA ATAATTTTCA AAGTTTACAT TTAGATACTA AGCTAGTTAA TTTTAGTCCT GATGGAAGAT TAATAGCTAC TGTTGGAATT GATAGTATTG TAAGACTTTG GAATTTATCA GGGCGACAAA TTAACCAATT TGAATTTTCC GAAAATGTAA TTGATATAGC CTTTAGTTCA GATGGAAAAA AAATTGCTGT AGCTGATAGT AACGGTCAAA TTTGGTTGAT TTATTTGGAA AATTTAGAGG AGCTTTTGAG TAAAGGATGT AGGTTTTTAT TAAAAAGACC AAACTATTTT ATGAGGGTAG AAGAATTTTG TCAGAATAGT AGGTAG
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Protein sequence | MNTSRQKSYY QVGGCLPINA PNYVQRRADE YFYEGLKAGE FCYVLNSRQM GKSSLQVRTI QRLQKQGICC AAIDISEIGN RGVTIEQWYA GILRILENNF NLSEYVNIRT WWRERDYLAP VQRLSEFINT VLLTKINQNI VIFIDEIDSI LALDFPVDDF LGFIRACYNK RAHNNEYNRL TFALLGVSTP QDLCQDKSST PFNIGRAIEL TGFQLDEAFS LIDGLVGICQ KPEAVLKEVL LWTGGQPFLT QKVCKLLIEN GELIINPAEE VAGIVRSKIV HNWEAQDMPE HLKTIRNRIL RKNKRIVRRL GLYQEILQNN LTGIIADNSS EQMELRLSGL VVKRDNKLIV ANLIYRTVFH ENMILEELEK LPPYSEEIKA WINSNCADKS YLLQGKHLQS ALVWATGKSL RNQDFQFLTT SQKLVLDAQT QALELTKIET KKAQAEVVKA QQKAQLWIQI GSTIFSISLI LSIGFSILAY QKFKLAQSSH EIEQIGTDAL LLAIEKSATN QELLEALPKA ISAGKRLKSL VNNNTPLAEY PGTRPILALQ MILDKLDEQE QFQDSILQKR KIILQGHNGA VTSVKFSPNQ EFLASAGVDG KVIIWNLEGK KITEWETEQK SINSLIFHPD NKYLATAGSN GTVKIWSLLK KNLGIKLYVL EISQTEVNSI SFSANGKYLA TAGINIPVQI WNLSSLPINI SSDQVLDDHG LIRNIHFSPN DNFLATLDGK STIRLWNLSE NKFKILDVEA ISMNFSINKP QILLTATSNG IVEMWQTYTG RLVNNFQSLH LDTKLVNFSP DGRLIATVGI DSIVRLWNLS GRQINQFEFS ENVIDIAFSS DGKKIAVADS NGQIWLIYLE NLEELLSKGC RFLLKRPNYF MRVEEFCQNS R
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