| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_4980 |
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| Symbol | |
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| ID | 4246635 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Trichodesmium erythraeum IMS101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008312 |
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| Strand | + |
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| Start bp | 7607098 |
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| End bp | 7609413 |
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| Gene Length | 2316 bp |
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| Protein Length | 771 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 638109791 |
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| Product | response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) |
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| Protein accession | YP_724367 |
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| Protein GI | 113478306 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains
[COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATAGAGA TCAAACATGG GATGTATCAA ATTAGACCAG CAGCTAGCCA AGAGTTACAC
TTGCTAATTG TGGAAGACGT TATGGAAGAT GTGGAGTTAA TCATACAGAT CTTAAAATCT
GATGGTATAA AGTTTACTTA CGATTATGAT ATTGCAAAAA GTTATCTAGA CTATCGACAA
TTGCTTAAAG ATAATGTATA TGATGCAATA TTATCAGATT ATCATGTAGT TCATTCTGAT
ATCTTTGAAG TGCTAGGATT ACTACAACAA TCAGAGCAAG AAATTCCTTT AATTTTAATT
GCAGAGGAGT TAGAAGAAAA GGAAGCTTTG AAAGTTTTAA AAGCTGGAGT TAATAGCTAT
GTTTTAAAAA ATAAATTATT TACTTTATCA ATTATTTTAG AGCGGGCGAT CGCTGAATAT
AAATTAAAAA AAGAACAGCA ACTGACAATT AAAAAATTAG AACAACAAGT TCAACAGAAA
GCCAAAGAAA CTGCTATTAC TAGTCAACTA GAGCCGATCA AAATGCTTAA AGATATGCAT
AATATTACTG AGGGCAAACA AGCAAGAAAA GCAAAGCTAG AAAATGAACG AAGATTGCGT
GCTCTGATAG AAAATACTAC AGATTTAACA TGGATTATTG ATGCTCATGG AACTTCTAGT
TATGTCAGTC CATCAGTAAT GAAAACTTTG GGGTATGTAC CAGAAGAAGT TGTGAGCCAA
AGTATATTCG ATCTAATTCA CATTAATGAT TTATTATTAG TGACTTGCAC TATCAATAAA
GCAATTAAAA ATCCCAATAT AAGTCAAACA GCTATTAAAT ACCGAGTTAA GAATAGTTCG
GGTTCTTGGT GTTTCTTTGA AGGTATTTTA ACTAACTTTT TAGACGATCC AGGAGTTAGA
GGCATCATTA TCAACAGTCA CGATATTACT CAACGTAAGC TAACTGAAGA ACGATGGAAA
TATAACGTAT TCCACGATGC ACTAACTCAT CTCCCTAACC ATGACCTGTT TATAGATCGT
TTGGAGGAAA AAATCAAGGA AACTAAGTGT CGAAAAAAAC TTTTGTTTGC AGTCCTACTG
GTAGATATTG ATAGATTTAA AGTTTTGAAT AATCGTTTTG GTCATCAAAT AACAAACAAA
CTGATAGTTA TGATAGCCAA GAAGTTAAAA ACATTGTTGA ATCATGGAAA TACAGTTGCT
CGTTTGAGTC CAGATGAATT TGGAATTTTG TTAGAAAATA TTTCAGATAT TAGCGATGCT
ACGTATATTG CTGATCAAAT CAACAAACAG CTAACTTTAC CAATTATTTT AGATGGAAAT
GAGATATTTA TTAATCCTAG TATCGGTATT GCTGTCGGTT CCAGAAATAT CAGTTCAGCA
GAACATATTT TGCAAGATGC AGAAATAGCG ATGTACCATG CCAAAAATTT AAGTAGAGGG
TCTCATCAAG TTTTTTGTAA TTCTATGCGG AGTCAATTTT TACAGCGTGT TCAGTTAGAG
AATGATTTAC AAAGTGCTCT CAACAATATT CAGAGTCAAT CACTTAGAAA GCAATCTGAG
TTTATACTTT ATTATCAACC AATTGTTTCC CTAGCTACAA ATGAGATTAC TGGTTTTGAA
GCACTGGTAC GTTGGCAACA TCCAAAACTT GGTTTCATTT CTCCTGATGA ATTTATTCCT
CTTGCAGAGG AAACAGGATT AATTATACCT CTCGGTTTGT GGATATTAAG AGAAGCTTGT
TTCCAATTAC GTAAATGGCA AAATCAATTG CCGAATAATT ATCATTTAAA CATTAATGTT
AATCTTTCTG CGAAGCAGTT TGCTCAAGTA GATTTAATTG ATCAAATAGA CAAAATTCTG
CTAGAAACTC AGCTTGATGG TAAGAGTTTA AAACTGGAAA TTACTGAAAG TACTTTGATC
GAAAATAATG AGTCTATCAG AGGAAAAATG TCTCGGTTAA GAGCGAGGAA TATTGATTTA
TATATTGATG ATTTTGGCAC GGGATATTCT TCTTTCAATT ATTTATACAA CTTTCCAATG
AATACTTTAA AAATTGACCG TTCGTTTATC AATAGAATAG GCCTTACTAA TTTAGTAAAT
AATAAGTCAA TTAAAACAAT AGAAATTCTT CGTTCAATTA TTACTTTATC TCATAATTTG
GGTATAAACG TTGTTGCTGA GGGGGTAGAA ACTCCAGAGC AAGCACTTCA GCTTCAAGCT
TTAAAGTGTG AATATGCTCA AGGTTATTTA TTTTCTAAAC CCCTTGATAT GACTGCAGCA
ACAGGTTTAG TCGCTCAGAT AAATAACCAG AAATAA
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| Protein sequence | MIEIKHGMYQ IRPAASQELH LLIVEDVMED VELIIQILKS DGIKFTYDYD IAKSYLDYRQ
LLKDNVYDAI LSDYHVVHSD IFEVLGLLQQ SEQEIPLILI AEELEEKEAL KVLKAGVNSY
VLKNKLFTLS IILERAIAEY KLKKEQQLTI KKLEQQVQQK AKETAITSQL EPIKMLKDMH
NITEGKQARK AKLENERRLR ALIENTTDLT WIIDAHGTSS YVSPSVMKTL GYVPEEVVSQ
SIFDLIHIND LLLVTCTINK AIKNPNISQT AIKYRVKNSS GSWCFFEGIL TNFLDDPGVR
GIIINSHDIT QRKLTEERWK YNVFHDALTH LPNHDLFIDR LEEKIKETKC RKKLLFAVLL
VDIDRFKVLN NRFGHQITNK LIVMIAKKLK TLLNHGNTVA RLSPDEFGIL LENISDISDA
TYIADQINKQ LTLPIILDGN EIFINPSIGI AVGSRNISSA EHILQDAEIA MYHAKNLSRG
SHQVFCNSMR SQFLQRVQLE NDLQSALNNI QSQSLRKQSE FILYYQPIVS LATNEITGFE
ALVRWQHPKL GFISPDEFIP LAEETGLIIP LGLWILREAC FQLRKWQNQL PNNYHLNINV
NLSAKQFAQV DLIDQIDKIL LETQLDGKSL KLEITESTLI ENNESIRGKM SRLRARNIDL
YIDDFGTGYS SFNYLYNFPM NTLKIDRSFI NRIGLTNLVN NKSIKTIEIL RSIITLSHNL
GINVVAEGVE TPEQALQLQA LKCEYAQGYL FSKPLDMTAA TGLVAQINNQ K
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