Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_4964 |
Symbol | |
ID | 4246618 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | + |
Start bp | 7570338 |
End bp | 7571768 |
Gene Length | 1431 bp |
Protein Length | 476 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 638109775 |
Product | radical SAM family protein |
Protein accession | YP_724351 |
Protein GI | 113478290 |
COG category | [C] Energy production and conversion |
COG ID | [COG1032] Fe-S oxidoreductase |
TIGRFAM ID | [TIGR03471] hopanoid biosynthesis associated radical SAM protein HpnJ |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.576294 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAAA CTCTATTTTT AAACCCCCCT TCCTTTGATG GTTTCGATGG AGGAGCCGGA GCCAGATATC AAGCCAAACG AGAAATCACC TCATTCTGGT ATCCAACCTG GTTAGCTCAA CCTGCTGCCC TAGTTCCCGG AAGTAAATTA GTAGATGCTC CTGCTCATTA TCAAACCGTA GAAGATGTAC TGAAAATTGC TAAAGACTAT GAACTAGTAA TTATGCATAC CAGTACCCCT TCCCTCCCCA ATGACATTAA ATGTGCAGAA GCAATTAAAA ATCAAAACCC TGAGACAAAA ATAGGTTTTG TTGGCGCCCA TGTAGCAGTT TTACCAGAAA AAACTCTCAA AGATCATCCA ATAATTGACT TTGTTTGTCG CAACGAATTT GATTATACCT GTAAAGAATT ATCCCAAGGA AAACCTTTTG CAAAAATTAA AGGATTGAGT TATTATGATA CCCAAGGTAA TATTCACCAT ACCCCAGAAC GAGAATTAAT TCATGACTGG GATGCCATGC CCAGTGTTTT TCCAGTTTAT GCAGAACATC TCAATATTCG TAACTATCTA ATTGGTTATT TACTTAATCC TTATATATCC TTATATACAG GACGAGGTTG CCCTGCTAAA TGTACTTTTT GTTTGTGGCC ACAAACTATT GGCGGACATC AATATCGGGC TAAAAGTCCA GAAGCAGTAG GGCGAGAAAT GGCAGAGGCC AAAGCAATTT GGGGTAGCTC CGTGCGAGAA TACTTTTTTG ATGACGATAC CTTTACCATT GATAAAAAAC GAGCGATCGC CATTAGCGAA CATTTACAGC GACTGAAGCT AACCTGGAGT TGTAATGCTC GTGGGAATTT AGATTATAAT ACCCTCAAAG AATTGAAAAA AAACGGACTA CGTTTGCTAT TAGTCGGTTT TGAATCTGGA AATCAGAAAA TTTTGGATGG AGTCAATAAA GGAATTAAAT TAGAAGTAGC CCGGAAATTT ATGGAAAATT GCCATAAGTT AGGAATTAAA GTTCATGGAG CTTTCATTCT CGGTTTACCC AATGAGAGTC AGGAAACTAT TGAGGAGACC ATCCGTTTTG CTTGTGAAGT CAACCCCCAT ACAATTCAAG TTTCCATTGC TTCCCCCTAT CCAGGAACAG AATTATATAC TCAAGCAGAG AAAAATGGTT GGTTTACTGG AGACTCTTTA GTTGCTAGTT CTGGAATTCA AATGTCCGCA TTACAGTACC CTCATTTGTC AGGTAGTGAA ATTGAAGATG GAGTGGAACA GATGTATCGA CGGTTTTATT TTAGACCCAA GTCTATCATT CCTATAGTTG GTGAAATGTT AGCAGATCCA CAAATGTTAG TACGTCGTTT ACGGGAAGGC AAAGAATTTT TGTCTTACCT GAGAGAGCGT CATCAGAGAG CATTGACTTG A
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Protein sequence | MKKTLFLNPP SFDGFDGGAG ARYQAKREIT SFWYPTWLAQ PAALVPGSKL VDAPAHYQTV EDVLKIAKDY ELVIMHTSTP SLPNDIKCAE AIKNQNPETK IGFVGAHVAV LPEKTLKDHP IIDFVCRNEF DYTCKELSQG KPFAKIKGLS YYDTQGNIHH TPERELIHDW DAMPSVFPVY AEHLNIRNYL IGYLLNPYIS LYTGRGCPAK CTFCLWPQTI GGHQYRAKSP EAVGREMAEA KAIWGSSVRE YFFDDDTFTI DKKRAIAISE HLQRLKLTWS CNARGNLDYN TLKELKKNGL RLLLVGFESG NQKILDGVNK GIKLEVARKF MENCHKLGIK VHGAFILGLP NESQETIEET IRFACEVNPH TIQVSIASPY PGTELYTQAE KNGWFTGDSL VASSGIQMSA LQYPHLSGSE IEDGVEQMYR RFYFRPKSII PIVGEMLADP QMLVRRLREG KEFLSYLRER HQRALT
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