Gene Tery_4955 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_4955 
Symbol 
ID4246609 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp7548844 
End bp7549995 
Gene Length1152 bp 
Protein Length383 aa 
Translation table11 
GC content37% 
IMG OID638109766 
ProductDegT/DnrJ/EryC1/StrS aminotransferase 
Protein accessionYP_724342 
Protein GI113478281 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGTAA ATCAACAAAT TAAGCCATTT TATTTTGATA TTTCAAATAA TGAAATTCAA 
TATTTCTTAT TAGAATCAGA GAAAATTTTA AAGTCTGGGC AACTGATTTT GGGGAAACAT
ACTACAGAAT TTGAAAAAGC ATTTGCTGAG TATGTAGGGA CAAAGTACGC GATCGCTGTG
AATAGTGGTT CTTCTGGACT AGAAATTATC TTACGCTTAA AAAAAGTAGA GGGAACAACT
GTTTTAGTTC CTACCAATAC TAACTTTGCC ACTATTGCGT CGGTAATTCG GGCTCAAGGA
AAGGTGCAAT ACTTGGATAT GGATGAAAAA ACATTTGCAC CTTCCTTAGA AATGGTAAAA
GAGGCAGTAG AAAAAGGTAA AAATCTTTCA GAGAAAATTT CTGGTGTATT GTGGGTTCAT
ATTGGAGGTG TAATTTCTCC TGAGTTTCCC CAAATAGTAG AATATTGTCA TCAGCAAGGG
TTGTTTGTTC TTGAAGATAC TGCCCATGCT CATGGTAGCA AAATAAATGG TGTCAATGCT
GGGAATTTGG GAGACGGTGC TGCTTTTTCA TTTTTCCCGA CCAAAGTTAT GACAACCTGT
GAAGGAGGAA TGATAACTCT CAATAATGAG GAGGAAGATT ATATCGCGCG ATCGCTCAGA
AACCAAGGAA AGCAAGGAAT GAATTTTGGT GGTTTACATA CAGATTTTGG GAATAGTACG
CGGATCACGG AAATGAATGC TCTCCTAGGT AGGATCCATT TAGCAAAGTT ACCAGAAATG
TTGCAAAAAC GGCAGCAAGC TTATGAGTTA ATTACAGCAC CTTTAAAAGA AGCTGGTATA
TCTTTTGTGT CTACAGAAAA AATGGATGTA GCTAGTAATT ATAAATTAAT TGTTCATTTA
CCAGAAGGAA AAAACCCTCA AGAGGTAAAA AAGGCTATGG CAGAGAAAGA AATATATTTA
GGTGGAACAG TTTATGAAAT ACCTTGTCAT CAGCAACCAG TTTTTCAAGG TATTTGTGAA
GGTCAGAGTT TTCCTTACGC CGAACGTTGG TGTCCGAATC ATATTTGCCC GCCTTTAACT
TCTGGTATGA CAGAAGAAGA TGCTGAACGA GTGGGAAAAG CTTTAGTTGA AGTACTCTCA
ATGTTTGGCT GA
 
Protein sequence
MKVNQQIKPF YFDISNNEIQ YFLLESEKIL KSGQLILGKH TTEFEKAFAE YVGTKYAIAV 
NSGSSGLEII LRLKKVEGTT VLVPTNTNFA TIASVIRAQG KVQYLDMDEK TFAPSLEMVK
EAVEKGKNLS EKISGVLWVH IGGVISPEFP QIVEYCHQQG LFVLEDTAHA HGSKINGVNA
GNLGDGAAFS FFPTKVMTTC EGGMITLNNE EEDYIARSLR NQGKQGMNFG GLHTDFGNST
RITEMNALLG RIHLAKLPEM LQKRQQAYEL ITAPLKEAGI SFVSTEKMDV ASNYKLIVHL
PEGKNPQEVK KAMAEKEIYL GGTVYEIPCH QQPVFQGICE GQSFPYAERW CPNHICPPLT
SGMTEEDAER VGKALVEVLS MFG