| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_4954 |
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| Symbol | |
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| ID | 4246608 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Trichodesmium erythraeum IMS101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008312 |
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| Strand | + |
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| Start bp | 7547130 |
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| End bp | 7548305 |
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| Gene Length | 1176 bp |
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| Protein Length | 391 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 638109765 |
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| Product | glycosyl transferase family protein |
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| Protein accession | YP_724341 |
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| Protein GI | 113478280 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1215] Glycosyltransferases, probably involved in cell wall biogenesis |
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| TIGRFAM ID | [TIGR03472] hopanoid biosynthesis associated glycosyl transferase protein HpnI |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00767556 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCAACCC TTGTAGAAAT ACTTCAAATA ATTTGCCTCA TACCCATCAT TAGTGGGTGT
ATATATTTAA TCTTAAGTGT CTGGACAATT AGAAATTTTT TCAGAAAAAC CACTACAGAA
ATAAATGCCA CAGAAAAATT TCAGCCTCCT GTAACTGTAC TTAAACCAAT ACGGGGGATC
GAAAAAAACC TGAAGTCAAA TCTGCATACT ATTACTATTC AAGATTGGCC AGAGTATCAA
GTAATTTATT CTATTCAAGA CCCTCAAGAT TCAGCTCTCC CTATTCTTGA CGAGCTTCAA
GCAGAAGTAG ACAACCAGAA AATTTCCGTT GTTATTGACA ATAAACAAGC AGGAGCTAAT
GGCAAGGTTA ATAACTTACT TGGTGCAATA GCACAAGCAC GTCATCAGAT TATTATTATT
AGCGATAGTG ATACTAATCT TAAACCTGAC TATATCAAAA ATATCATATC TCCTTTATCA
AATCCTAATG TGGGAGCTGT CTGCACTCTC TTTAAAGTCA AAAGTGCTTA TAGATGGTTT
GAGAAGATGG AATTGTTAAC AATAAATGCT GACTTTATTC CTAGTGTTAT ATTCGCAGCA
GTCACGGGAG CATCCAATGC TTGTTTGGGA CCCTCGATCG CTATAAGTCG CAGCACATTA
CAAGAACTGG GTGGCCTTGA GAGTCTGGCA GATTATCTTG TAGAAGATTA TGAATTAGGA
CGGAGGGTAT GGACTTCTGG AAAAAAAATG GTGCTTTTGC CATATACTAT TGATGTGACT
GTAGACTTAA AGAATTGGCA AGAGTGGTGG ACTCATCAAG TCTATTGGGA TCAGAATACA
TATTTGGCAC GTCCCTGGCC TTTTATTGCA ACTATATTAA TCCGGGCAGT ACCTTTTGCT
ATTTTGTTCG CTATAGTGAG AATGGGGGAT TTACTCGGAT TAGGAGTATT AGGGTTTACT
TTGGCTTTAC GACTTTTCAG CGCTGGGATA ACTTTAAAAG AGTTGAAAGA TGTAGAAGGT
TTTCAAAGTC TTTACTTATT ACCTTTACGT GACACTTTCG GTTTAATATT TTGGTTTTTG
GCGTTGACTA AGCGTACAGT GGTATGGAGG GGTGTTAAAT ACAAATTGGT CGATCATGGA
AAAATGGTTC CCGTCAGCAA AGGAGTAGGG AATTAG
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| Protein sequence | MPTLVEILQI ICLIPIISGC IYLILSVWTI RNFFRKTTTE INATEKFQPP VTVLKPIRGI
EKNLKSNLHT ITIQDWPEYQ VIYSIQDPQD SALPILDELQ AEVDNQKISV VIDNKQAGAN
GKVNNLLGAI AQARHQIIII SDSDTNLKPD YIKNIISPLS NPNVGAVCTL FKVKSAYRWF
EKMELLTINA DFIPSVIFAA VTGASNACLG PSIAISRSTL QELGGLESLA DYLVEDYELG
RRVWTSGKKM VLLPYTIDVT VDLKNWQEWW THQVYWDQNT YLARPWPFIA TILIRAVPFA
ILFAIVRMGD LLGLGVLGFT LALRLFSAGI TLKELKDVEG FQSLYLLPLR DTFGLIFWFL
ALTKRTVVWR GVKYKLVDHG KMVPVSKGVG N
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