Gene Tery_4946 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_4946 
Symbol 
ID4246600 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp7537610 
End bp7538287 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content32% 
IMG OID638109757 
Producthypothetical protein 
Protein accessionYP_724333 
Protein GI113478272 
COG category[R] General function prediction only 
COG ID[COG3926] Putative secretion activating protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTTGGA AAAAATTTAA TCAACCACAA CTAAAAATTA AATTTAAACC CCAAATAATT 
TTGGCAATTA TTTCATTCAT TTTGGCAGTG GGAATGCCTA TTAGTATTAA TAATAAAATT
CCTGCACTAG CTAGAACTGA AAAAAACTAC GAAAAAAAAT TATTTGAAAC TGCTCTATCT
TTTACTCTAT ACTTTGAAGG TGGATTTAGT AATCATCCAG CAGATAAAGG TGGTAGAACT
TACAAAGGAA TCTTACAAAC TGAATATAAT GCCTACCGAC GGCGAAGGGG TTTACCACGA
TTAGATATTA CTCAAATATC TGATGCTGAA CTCATAGAAA TTTATCAAGA TTATTGGGAT
AATAGTAGGT CAGCTACAAT GCATCCCTCT CTTGCTGTAG TTATGTTTGA TACTGCTGTT
AATTTTGGTA TTAACAACTC AATAACTTTT CTACAACAAG CCTTAGGTTT ACCACAAACA
GGTATATTTG ATCCTAAGAC TAAGAAAGCA TTGGTAAAGG GAAATAATCG AAATACTGCA
CTGCAAATTA TTAATGAAAG GATTATTTAT CGTTATAAAA GGGTACAAGA AGATGCAAGT
CAGATGGCTT TTTTTTATGG TTGGTTAGCT CGTGATTATA GTTTGTGGGG GTATGTGCAA
AAACTGAAAG ATAATTGA
 
Protein sequence
MIWKKFNQPQ LKIKFKPQII LAIISFILAV GMPISINNKI PALARTEKNY EKKLFETALS 
FTLYFEGGFS NHPADKGGRT YKGILQTEYN AYRRRRGLPR LDITQISDAE LIEIYQDYWD
NSRSATMHPS LAVVMFDTAV NFGINNSITF LQQALGLPQT GIFDPKTKKA LVKGNNRNTA
LQIINERIIY RYKRVQEDAS QMAFFYGWLA RDYSLWGYVQ KLKDN