Gene Tery_4897 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_4897 
Symbol 
ID4246551 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp7480163 
End bp7481179 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content34% 
IMG OID638109718 
ProductCHAD domain-containing protein 
Protein accessionYP_724294 
Protein GI113478233 
COG category[S] Function unknown 
COG ID[COG5607] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTACAC AAGTATCACC GAAAATCAAT AGCCTTGGAG ACTGGGCATC CTTAGCGTTT 
AAAAAGTATT TTTATAAAAC TCTCAAACAT GAAGCAGAGG TACTTAAAGA TCAAGATCCA
GAACAACTCC ATCAAATGCG GATAGGTATG CGTCGTTTGC GCTTTGCAGC TAAAGGTTTT
AGACCTGTTG TAGCTTTGCC AAAAGCTGCT AAAAATCAAA GAATTGGTAA AATTGCTCAT
TGTTTAGGAG GTTTAAGGGA TTTAGATGTG CTTTTAGAAG CTCTAGAAAA TCAATACAAA
CCAAATTTAC CTACTTCAGA ACAAGTCGAA CTAGATAAAG CTTTGCAAAA GTTACTAAAA
CAGCGTCATC AAGCTTTTAA GAAAGTACAA AAAATTCTTG GACATCAGAG TTATCTAATG
TATAAGCAGA AATTTCAGGA ATGGCTAGAT AACCCAATTT ACAAAGATGT TTCTCAACTA
CCCATTCAAG GAGTATTACC AGATTTATTA TTACCTGAAA TTAGTCAATT ATTTCTTCAT
TCAGGTTGGT TAGTAGGGGT AGAAAAAGAG AATTTAGAAA CAAGTGATAA TCATAATTTC
TTGCTACAAA AAACTAATTC CAAATATCAA GTCATTAAAA TTAATAATGA TATTTCTGCT
ATAAATATTA GTGATGCTGA GGAAGAAAGG CTACATAGTT TGCGTAAGGA AGTCAAGCGA
GTTCGTTACC AGATGAGTTT GTTTACTGAA TTTTATGGTT CAACTTATGA GGCTTATTTA
AAAGATATGA AAGAACTCCA AGAATATCTT GGTGATATTC AAGATAGTGC AATTATCAGA
AAATTTCTGG AAAATATCTG GCACACTAAC ATTGAGAAAG TTCTTCCCAA CTTAGTTATG
CAACTAAAAC ACAGCCGAGA GAAAGCCTTG CGCAAATGGC AAGTTTTGCA AAGACGGTAT
CTTAATATTC AAGTTCGACA AAATTTTCGC TCAGAATTAT TGCGACCTTT GAAATAA
 
Protein sequence
MTTQVSPKIN SLGDWASLAF KKYFYKTLKH EAEVLKDQDP EQLHQMRIGM RRLRFAAKGF 
RPVVALPKAA KNQRIGKIAH CLGGLRDLDV LLEALENQYK PNLPTSEQVE LDKALQKLLK
QRHQAFKKVQ KILGHQSYLM YKQKFQEWLD NPIYKDVSQL PIQGVLPDLL LPEISQLFLH
SGWLVGVEKE NLETSDNHNF LLQKTNSKYQ VIKINNDISA INISDAEEER LHSLRKEVKR
VRYQMSLFTE FYGSTYEAYL KDMKELQEYL GDIQDSAIIR KFLENIWHTN IEKVLPNLVM
QLKHSREKAL RKWQVLQRRY LNIQVRQNFR SELLRPLK