| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_4825 |
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| Symbol | lpxD |
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| ID | 4246479 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Trichodesmium erythraeum IMS101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008312 |
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| Strand | + |
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| Start bp | 7420788 |
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| End bp | 7421825 |
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| Gene Length | 1038 bp |
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| Protein Length | 345 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 638109666 |
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| Product | UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
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| Protein accession | YP_724242 |
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| Protein GI | 113478181 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1044] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
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| TIGRFAM ID | [TIGR01853] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00712722 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAATTTA GCAAACTTGC AAGTAAACTT GGTTCTGAGA CGATCACCTG TAGTCTGGAA
AAAATAAATC ATCTCGATCC AGATATCCAA GGTGTAGCTG CAATAGATGA GGCAAAACCA
GGTACTCTTA GTTATATTGA GGGTGCAAAA TTTGCTAATT ATTTGAAAAC GACAAATGCT
AGCGCTTTAA TTTTACCAAT GGATGAAACT CTACAAAAAT TGGCAGGTGA GCGTGGTATT
GGGTGGTTAT CTAGTAAGGA GCCGAGATTA TTATTTGCTC AGGCGATCGC TCTTTTTTAT
CGACCTTTTC AACCTACTCC TGAAATTCAT GCTACTTCTA TAGTTCATCC CACAGCAAAA
GTTGGTAAAA ATGTTTATCT TGGCGCTCAT GTTGTGGTTG AAGCAGGGGT AAAAATTGGT
GATAATGTTT GTATTTATCC GAATGTGGTG ATTTACCCAA ATGTGGAAAT AGGAGAAAAC
ACTATTTTAA ATGCTAACTG TTCGATTCAC GAACGGAGTC AGATAGGTAA AGGTTGTGTA
ATTCATAGTG GAGCAGTTAT TGGGGGAGAG GGCTTTGGTT TTGTGCCGAC TCCCGAAGGT
TGGTTTAAGA TGGAACAGTC TGGCAAGGTT ATTTTAGAGG ATGGGGTGGA AGTTGGAGGT
AATACTACTA TTGATAGACC TGCAGTGGGA GAAACTAGAA TTGGTAAAAA TACAAAGTTA
GATAATTTAG TACAAATTGG TCATGGTTGT AAAATTGGTA AAAATTGTGC TTTGGCTGCT
CAAGTTGGTT TAGCTGGTGG GGTGAAACTT GGGGATAATG TGATTTTAGC AGGTCAGGTA
GGAGTTGCTA ATCAGGCAAA AATAGGAGAT AGGGCAATCG CTACTGCTCA AGCGGGTGTT
CATAATGATG TTGCTGCGGG AGAGATTGTT TCTAGTAGTC CAGCGGTTCC TAATAAGATT
TATTTGAAAG CTTCTGCTAT TTATAAGCGT TTGCCAGAAA TTTATCAATT CGTCAAACAG
ATGAAAAGAA AATTATAA
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| Protein sequence | MKFSKLASKL GSETITCSLE KINHLDPDIQ GVAAIDEAKP GTLSYIEGAK FANYLKTTNA
SALILPMDET LQKLAGERGI GWLSSKEPRL LFAQAIALFY RPFQPTPEIH ATSIVHPTAK
VGKNVYLGAH VVVEAGVKIG DNVCIYPNVV IYPNVEIGEN TILNANCSIH ERSQIGKGCV
IHSGAVIGGE GFGFVPTPEG WFKMEQSGKV ILEDGVEVGG NTTIDRPAVG ETRIGKNTKL
DNLVQIGHGC KIGKNCALAA QVGLAGGVKL GDNVILAGQV GVANQAKIGD RAIATAQAGV
HNDVAAGEIV SSSPAVPNKI YLKASAIYKR LPEIYQFVKQ MKRKL
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