| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_4809 |
|---|
| Symbol | |
|---|
| ID | 4246463 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Trichodesmium erythraeum IMS101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008312 |
|---|
| Strand | - |
|---|
| Start bp | 7392524 |
|---|
| End bp | 7395448 |
|---|
| Gene Length | 2925 bp |
|---|
| Protein Length | 974 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 638109654 |
|---|
| Product | calcium-translocating P-type ATPase, PMCA-type |
|---|
| Protein accession | YP_724230 |
|---|
| Protein GI | 113478169 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0474] Cation transport ATPase |
|---|
| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01517] plasma-membrane calcium-translocating P-type ATPase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAACAA CAGAAGAACC ACGTCAAAAA CACAGCCGTC ATCAAGGACT GACAGAGGCT
GAGGTTGAGG CAAGTAGGCA AAAATATGGT TATAATTTAT TAACGCCACC CAAGAGATTG
CCCTGGTGGA AATTATGGTT AGAAAAGTTT GAAGACCCAA TAATTCGGAT TTTAATAATT
GCCGCTGTTA TTGCTATTAC TGTCGGAATT TTTGAAGGTA ATTATGTAGA AGGTTTAGGT
ATTATTGCTG CTATCCTAAT AGCTACAACT GTTGCTTTTT TGAATGAATA TAAAGCTAAT
CAAGAATTCG AGATTCTTAA TCGAGTAAAT GATGAAATAC CAATCACAGT AATTCGGGAT
AATAACATTA CAACTATTCC GAAAAAAGAC TTAGTAGTAG GGGATTTGGT AATCATAGAA
ACAGGAGACG AAATACCAGC AGATGGTCAA GTAATAGAGG CAGTTTCTCT AGAAGTTAAT
GAAGCTAGTT TAACTGGGGA AGCAATGTCA GTTACTAAAA CAGTAGAGAC AAATTTATCC
TTTAACAATC ATAATAGTGA CGCTTACCCT CCCAATAAAG TTTTACGAGA TACTGTAGTG
AATGATGGAC ATGGAATTAT TGAAATTACG GCCATTGGTG ATGCTACAGA AATCGGTAAA
ACTGCTAGAT GTGTTCTTGA CATTACAGAT GTAGAAACTC CTCTAAATCT GCAACTGGCA
CGCCTCAGTA ATCTAATTGG TATCCTTGGT TTAGGTGTAG CAGTGTTAAT AGATATGGCT
CTAGTAGTAC GGGGTATATT TACAGGAGAA CTCAACCTCA CCTTTAGACA ATGGTACATT
ATCAGTATCC TTGCCATTAG TTTAGTTACT GCCTTAACTA GAGTCTGGTT GCCAATAATT
ATAGATGGAT TAGAATCAGT AGGTAAGGAA ATAGAAGTTC CGGGATGGTT AGAAGATGAT
AGTAAGATCG CCTGGTCAAG AAATCTTTTG ACCGCCCTAG TAATATTTGG CATCGGTATG
GGAGTCGGGT ATTATTTAGA GTGGGTTCCC GCTTCTCCCA CTGATTGGAT CGCTACAGAT
GTTGCCCTGA AATTCTTAAC ATACTTTATG ATTGCAGTTG CAGTTATAGT TGTTGCCGTA
CCTGAAGGAT TAGCTCTAAG TGTTACCCTA AGTCTTGCCT ACAGTATTCA GAAAATGACT
AAACAAAATA ATTTAGTTCG CCGGATGCAC GCTTGCGAAA CTATTGGTGC CACAACGGTT
ATTTGTTCTG ATAAAACAGG CACGTTAACT GAAAACAAAA TGCAGGTGAG TGATTTCCAG
TTTCCTAGTT TTGAGAATAG CACTCTCAAT GCTGAAAATA TTATAGTTGA AGCGATATGT
GCAAACACTA CAGCTAACTT AGAACATAGA AAAGAGGGAG TTTCTACTCC TTTGGGAGAC
CATACAGAAG CATCTTTGCT ATTGTGGTTA GAGCTAAACA ACATTGACTA TATTGACAAA
CGAGAAGATT TTGAGGTTAT TAGTCAGTTA ACTTTTTCTT CAGACAGAAA GTACATGGCA
ACTCTCGGAG TTTCCCCTAC TATAGGCGAA AAAATACTCC ATATTAAGGG TGCGCCCGAA
ATATTGTTAG TAAGTTGCAA TCAAGTTCTG ACCTCAGATG GAATCCAAGC TTTTACAAAT
TCTCAGAGAG TATCGCTCAC AGCAGAGTTA AATAAGCATG AATCTATTGG CAGACGGACT
TTAGGATTTG CCTATGTTAG AGATCCTCAA AACTATCAAC AAGGGTGTGA ACTTGAACAA
TACGATGATC TCGTTTGGTT GGGTTTTGTG GCAATCGCCG ATCCAGTGCG AGAAGAAGTA
CCCCTAGCAG TAGAAATCTG CCGAAAAGCT GGGGTTAAAG TGAAAATGAT TACAGGGGAT
AGTCGTTTGA CTGCAATAGA AATTGCTCGT GAAATTGGAA TTATAAGTGA GGATGAGGAT
AATGATTATT CTATCACTGG TAACAAACTC CGTGAGTTGG ATGATGCAGC AGCTTTAGAA
ATGGTGCAAA AAGCAAAAGT GATTGCTAGA GCACGACCAC AGGATAAGCA ACGTATTGTA
CAACTACTAC AAGGTAGTGG GGAAGTGGTG GCAGTTACGG GTGATGGGAC TAACGATGCA
CCTGCTTTAA ACCAAGCGCA GGTTGGTTTG TCAATGGGTA GTGGTACTTC TGTAGCTAAG
GAAGCTAGCG ATATTATCAT TTTGAATGAT TCTTTTGGTA GTATCGAAAA TGCAGTTATG
TGGGGGCGAT CGCTGTACCA AAATATTCAA AAGTTTATTC TTTTCCAGTT AACAATAAAT
GTTGCTGCTT GTGGGATAGC TTTATTAGGT CCGTTTATTG GAATTAATCT GCCGTTTACT
GTGATTCAAC TATTGTGGGT GAATTTAATT ATGGATACTT TTGCTGCATT GGCTTTGGCA
ACGGAACCAC CTAATGAAAA AGTTATGGAG AAAGCACCAA GAAATTCTCA AGAATTTATA
ATTTCCCAAT CAATGGCGGT GAATATTTTC TCTGTAGCAT CAATATTTTT GGTGTTTTTT
GTCGGTTTCT TGCTGTATAT CCAAAAAGAC CAAGTAGTAA CTCCTTATGA ATTGTCTCTA
TTTTTCACTA CATTTGTTAT GTTGCAATTT TGGAATATGT TTAATGCTAA ATGTTTTGGT
TTAAGGGAAT CTGCATTTTC TAATATTAGT AAAAATGCTA GTTTTATAGT TATTGCTGCA
TTGATTTTTG TGGGGCAAAT TTTGATGGTT CAATATGGAG GAAGTGTATT TAGAACAGTT
CCTTTATCTT TAAGAGATTG GTTAATAATT ATTGGTGGTA CTTCTATTGT ATTCTGGATA
GGTGAAATTT GGCGGATGAT TCAAATACGG TTTAAGGCTT CTTAA
|
|---|
| Protein sequence | MKTTEEPRQK HSRHQGLTEA EVEASRQKYG YNLLTPPKRL PWWKLWLEKF EDPIIRILII
AAVIAITVGI FEGNYVEGLG IIAAILIATT VAFLNEYKAN QEFEILNRVN DEIPITVIRD
NNITTIPKKD LVVGDLVIIE TGDEIPADGQ VIEAVSLEVN EASLTGEAMS VTKTVETNLS
FNNHNSDAYP PNKVLRDTVV NDGHGIIEIT AIGDATEIGK TARCVLDITD VETPLNLQLA
RLSNLIGILG LGVAVLIDMA LVVRGIFTGE LNLTFRQWYI ISILAISLVT ALTRVWLPII
IDGLESVGKE IEVPGWLEDD SKIAWSRNLL TALVIFGIGM GVGYYLEWVP ASPTDWIATD
VALKFLTYFM IAVAVIVVAV PEGLALSVTL SLAYSIQKMT KQNNLVRRMH ACETIGATTV
ICSDKTGTLT ENKMQVSDFQ FPSFENSTLN AENIIVEAIC ANTTANLEHR KEGVSTPLGD
HTEASLLLWL ELNNIDYIDK REDFEVISQL TFSSDRKYMA TLGVSPTIGE KILHIKGAPE
ILLVSCNQVL TSDGIQAFTN SQRVSLTAEL NKHESIGRRT LGFAYVRDPQ NYQQGCELEQ
YDDLVWLGFV AIADPVREEV PLAVEICRKA GVKVKMITGD SRLTAIEIAR EIGIISEDED
NDYSITGNKL RELDDAAALE MVQKAKVIAR ARPQDKQRIV QLLQGSGEVV AVTGDGTNDA
PALNQAQVGL SMGSGTSVAK EASDIIILND SFGSIENAVM WGRSLYQNIQ KFILFQLTIN
VAACGIALLG PFIGINLPFT VIQLLWVNLI MDTFAALALA TEPPNEKVME KAPRNSQEFI
ISQSMAVNIF SVASIFLVFF VGFLLYIQKD QVVTPYELSL FFTTFVMLQF WNMFNAKCFG
LRESAFSNIS KNASFIVIAA LIFVGQILMV QYGGSVFRTV PLSLRDWLII IGGTSIVFWI
GEIWRMIQIR FKAS
|
|---|
| |