| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_4782 |
|---|
| Symbol | |
|---|
| ID | 4246436 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Trichodesmium erythraeum IMS101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008312 |
|---|
| Strand | + |
|---|
| Start bp | 7347148 |
|---|
| End bp | 7349388 |
|---|
| Gene Length | 2241 bp |
|---|
| Protein Length | 746 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 638109631 |
|---|
| Product | TPR repeat-containing serine/threonin protein kinase |
|---|
| Protein accession | YP_724207 |
|---|
| Protein GI | 113478146 |
|---|
| COG category | [K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0515] Serine/threonine protein kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.20458 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTATACCA TGAAAATGAT TGGTCAACTG CTAGATGGAC GTTACCGTGT CGTTCAAATT
CTTAATTCTG GTGCATTTGG ACAAACCTAT TTGGCGGCTG ATACTCGTCG TCCAGGGCAT
CCTCAATGTG TAGTTAAGGT GCTAAGGACT CCTAGTAACA GTTTACTCAA AACTGCTCAC
CGTTTGTTCA AGCAAGAGGC AGAAATATTA GAAAAATTAG GTAGGCATTC TCAGATTCCT
TTATTACTAG CTTACTTTGA AGAAAATAAT CAATTTTATT TGGTAGAAGA ATTTATTTAT
GGAACACCAT TGGAGAAAGA AATTATACCT GGTAAACCTT GGTCGGAAAA ACAAGTAATT
AAGCTACTAT TAGAAATCTT AGAAATCTTA GGGTTTGTAC ATAGATATGA GGTTATTCAT
CGAGATGTTA ATCCATCAAA CTTAATTAGA CGCCAACTAG ATAGAAAATT AGTTTTAATT
GACTTTGGTT CAATTAAAGA AATGAGTCAT CAGATAGCAC AAGAAAATGG AGCAAGACAA
AGAACTATTG CTACAGGTAC CCCCTCCTAT ATGCCTATCG AACAATTTCA AGGTATTCCT
CAATATAATA GCGATATATA TGCAGTAGGT ATGATTGGTA TTCAAGCTCT AACAGGAATT
CCTAGTGGTG AACTGCCAAA ACTACAAGAT ATGAGTAAAT CAAATTCTAG TGGCATACTC
TGGCGCAGTC AGGCACAATG TTCCTCAAAT TTAGCTGATA TCCTGGAAAA AATGGTACAT
TGTCATTATG CTCAACGTTA CCAGTCTATA GAAAAAGTTG TTATAGCCCT AGAAAAAATT
AACCGCCGTT CTAAAATAGA GATACCACTC AAACTACCAT TAGTTCAAAA TCAGATAAGT
AGTTCTCAAA CTCAAACAAC TGTATTTGAA ATGCTATCGC GTTCATTATG GTTTACTTTA
TTTGGTTTTG CCAGCGTAGG GATCATTGCA GTATTAATTG CAGTAGTAAG TTTTTTTAAT
CGTCCCAACT CTATTAAAGC AGAGAAAGTA TTTAAACAAG GGGAAGAACG TGCCAGAGAT
GGTGATATAC CAGCAGCAAT TTTATTATAC AGCAAAGCGA TCAAAGGTTT TGAAAAACCA
GAGTATTTTT ACGGAAGGGG GAATGCTTAT TATGAGTTAA AAAACTACCA AAATGCTATT
AGTGACTACA CGAAAGCGAT CCTTCTTAAC CCTAGCAATG TTAATGCCTA TTTTAACAGA
GGTGTGGTTT ATTTTGAGCA ACAAAATTAT CCTAAAGCAA TTAATGATTT CACCCAAATA
TTACGCCTTC AACCTGAACA TGCTGAAGCT TACTATAAAC GAGGATTAGT TTACTACAAA
TCCCAAGACT ATCTTAAGGC AATTCAAGAT TACACTCAAG TCATTGGACT GCGACCGAAT
ACTTTAGATG CTTATAATGC TTACCTTGGT AGAGGGGTAG CTTATGCAGC TAATAATAAT
TTACAAAAAG CGATAGCAGA TTATACCCAG ATGATTAAAA TTAAACCCCA AAAAATAGAT
GGTTATTATA GAAGAGGTAG AGCTAGGTTT TTTATGGGAG ATTATCAAGG TTCTTTAGAT
GATTATAATC AAGTTATTAA AATAAACCCA AAAAATGAAG ACGCTTATGC TAGACGTTGT
AGCACATACT TGAATTTAGC AGAGTATGAA AAAGCTGCAT CTGACTGCAC TGAAGCAATT
AAAATTAGAC CTAAAAATGA AGTTGCTTAT AATAATCGAT GTATTGCTTA TCTAAATTTA
CAAGAGTATC AAAAAGCTAT ATCTGATTGT ACTAAAAGAA TTGAACTTGA ACCCCAAAAT
GCTGAAGGTT ATATTAACAG AGGTTTGGCT TATACTGAAG ACATGCAATT GCAAAAGGCT
ATAGAAGATT ATACTCAAGC AATAGGATTA AACCCAAACA AGCCTGAAGC TTATGCAAAT
CGTGCTAATG TTTACAATGA ACAAAAAAAC TATCAGCAAG CGATCGCTGA TTATGTTCAA
GCTATTAGAC TTAACCCCGA ATATGCACGA GCTTATTACA GTAGAGGATT AGTGAGGGTT
AATATGGGAG ATATAAAAGG AGCAATTAGT GATTTGGATA CAGCCGCTCA ACTTTATTTA
GCTCAAGGTC GTGCAGGAGG TTATAAAGAT GCTCAATATG AAATTGAAAA ATTGAAAAAA
TTAGATTGCC AGAATTGTTG A
|
|---|
| Protein sequence | MYTMKMIGQL LDGRYRVVQI LNSGAFGQTY LAADTRRPGH PQCVVKVLRT PSNSLLKTAH
RLFKQEAEIL EKLGRHSQIP LLLAYFEENN QFYLVEEFIY GTPLEKEIIP GKPWSEKQVI
KLLLEILEIL GFVHRYEVIH RDVNPSNLIR RQLDRKLVLI DFGSIKEMSH QIAQENGARQ
RTIATGTPSY MPIEQFQGIP QYNSDIYAVG MIGIQALTGI PSGELPKLQD MSKSNSSGIL
WRSQAQCSSN LADILEKMVH CHYAQRYQSI EKVVIALEKI NRRSKIEIPL KLPLVQNQIS
SSQTQTTVFE MLSRSLWFTL FGFASVGIIA VLIAVVSFFN RPNSIKAEKV FKQGEERARD
GDIPAAILLY SKAIKGFEKP EYFYGRGNAY YELKNYQNAI SDYTKAILLN PSNVNAYFNR
GVVYFEQQNY PKAINDFTQI LRLQPEHAEA YYKRGLVYYK SQDYLKAIQD YTQVIGLRPN
TLDAYNAYLG RGVAYAANNN LQKAIADYTQ MIKIKPQKID GYYRRGRARF FMGDYQGSLD
DYNQVIKINP KNEDAYARRC STYLNLAEYE KAASDCTEAI KIRPKNEVAY NNRCIAYLNL
QEYQKAISDC TKRIELEPQN AEGYINRGLA YTEDMQLQKA IEDYTQAIGL NPNKPEAYAN
RANVYNEQKN YQQAIADYVQ AIRLNPEYAR AYYSRGLVRV NMGDIKGAIS DLDTAAQLYL
AQGRAGGYKD AQYEIEKLKK LDCQNC
|
|---|
| |