| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_4762 |
|---|
| Symbol | |
|---|
| ID | 4246416 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Trichodesmium erythraeum IMS101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008312 |
|---|
| Strand | + |
|---|
| Start bp | 7314886 |
|---|
| End bp | 7315557 |
|---|
| Gene Length | 672 bp |
|---|
| Protein Length | 223 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 638109613 |
|---|
| Product | HEAT repeat-containing PBS lyase |
|---|
| Protein accession | YP_724189 |
|---|
| Protein GI | 113478128 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1413] FOG: HEAT repeat |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.122338 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.117024 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAAATA TGAATTTAGA ACAAATATCA GTTCAACTAG ATAGCGAAAA TTCTCGTGAT
CGCCTCCTTG CTCTTGCCCA TCTAAGAGAA GTATCTGCTA CTGAAGCAGT TCCTCTTATC
AAAAAAGTAT TGTATGATTC TAACTTACCA GTACGCTCTA TGGCAGTATT TGCGCTGGGC
CTAAAACAGA CAGAGGAATG CTACCCAATT TTAGTAGAAT TACTAGAAAA AGATCCAGAT
TATGGTGTCC GTGCTGATGC AGCAGGAGCT TTAGGCTATC TGGGAGATGT TAGAGCATTT
AAACCTTTAG CCCAAGCATT TTACCAAGAT ACCAGTTGGT TAGTACGTTT CAGTGCAACA
GTTGCTTTGG GAAACCTCAG AGATCAACGT GCCCATGATT TATTGATAGA AGCGTTAGAC
AGTCAGGAGT TAGTAATACA ACAAGCAGCG ATCGCTGCTT TAGGAGAAAT TGGAGACTTA
AAAGCTGTAG ATCATATTCT TAAGTTTGCC CTTTCGGAAG ATTGGTTGAT CCGTCAAAAT
TTAGCAAAAG CTTTAGGAAA TATATCTATT CCTAAGAGTA TATCTGCCTT GAAATATTTA
GAAAAAGATA CTCATCCTCA AGTATCTCAA GCAGCAAGCA TTTCTCTACA ACATTTACTC
AAACTTAGTT GA
|
|---|
| Protein sequence | MQNMNLEQIS VQLDSENSRD RLLALAHLRE VSATEAVPLI KKVLYDSNLP VRSMAVFALG
LKQTEECYPI LVELLEKDPD YGVRADAAGA LGYLGDVRAF KPLAQAFYQD TSWLVRFSAT
VALGNLRDQR AHDLLIEALD SQELVIQQAA IAALGEIGDL KAVDHILKFA LSEDWLIRQN
LAKALGNISI PKSISALKYL EKDTHPQVSQ AASISLQHLL KLS
|
|---|
| |