Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_4731 |
Symbol | |
ID | 4246385 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | - |
Start bp | 7261363 |
End bp | 7262676 |
Gene Length | 1314 bp |
Protein Length | 437 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 638109589 |
Product | RNA-directed DNA polymerase (Reverse transcriptase) |
Protein accession | YP_724165 |
Protein GI | 113478104 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3344] Retron-type reverse transcriptase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACTGA TGCTACGCAG TTACTCCAAC CTACTACTGT CAGTGCGAAG GGTGACTCAA GAAAACCAAG GGATACGAAG GATGGGGAGA GACGCTCAGA CGGCAAAGAC TTCTGTAGAA AAAGTCAAAC TTGTCAAAGA AATGCTGACA TATAGGCTGT GGCAAGCCAA ACCAGCTAAA AGGGTATACA TCCCCAAGGC AAACCGTCAA CAAGGTCCAC TAGGCATCCC CACAGTCAAA AACCGAGTTG CTCAGGCAGT TGTTAAGAAT GGGTTAGAAC CAATTTGGGA CGCAGAATTC GAGACAAATT CCTACGGATT CCACCCAGGT AGAAGTTGCC ATGATCCTCT TGAACAATTC TGGATTAGAC TCCAAAAAGG AAAGGATACA TGGATACTAG ATGTCGATAT TAAACAAGAT TTTGACAATA TTACCCATGA ATACATCCTC AAAGCTATCG GAGAAATCCC TGGTAGAGAG TTAATCAAGC AATGGCTAAA AGCAGGGTAT TTAGAAGCCG AAGTTTTCCA CAAGACAGAG GGGGGGACTT CTTCAAGAGG CATAATTAGC CCCTTACTTG CCAACATAGC CTTTGATGGG ATGGAAAGAT TGTTAGCTAG GTACAAAACA GTGAAAACCT ATCAATGTAC AAGGCCGACA ACGGATGAGG AATACACCAA GAAAAAGAAG TTAGATAAAT ACGGATTTAT CCGATACGCT GATGACTTCA TAATCACCGC TCGAAGTGAG GAAGACATCA AAGCGATAAT CCCCACTATT GAAAAATGGC TATCAGAAAG AGGATTAGAA CTTAATAAGG ACAAAACCAA CTTAGTTCAT ATTGAACAAG GATTCAACTT TTTAGGGTTC AATGTCCGCC AGTTCAACGG TAGCTGCTTC ATAGTTCCAC AAAAAGAGAA AGTTAAGGAA TTTCTCACAC TAATTCGGGG GTGGCTCAAA GCACACCCGA CCAGTACACA AGAAGCAGTA ATTGCAAACC TTAATTCAAT TATTAGAGGA TGGGGGAACT ACTACAGACA TGGTGTAAGT CAACGAATAT TTTCCTATGT TGACCACGAA ATTTGGAAAT CACTCTGGCA ATGGTCATTA AGAAGACACT CGAAGCGAGT GGGGAAACAA AAAGGAAAAG GTAAGGAATG GGTGCGAAAG AAATACTTCA AAACCGTCAA CGGAAACAAG TGGACTTTCG CAACAAACAT AAGCAATAGG TATGGCAAGA AGGAAACAAT AGCCATCTGC CGACTAGGAA AAGTTCCCAT TCAACGTCAT GTAAAAATTA AAGGCACGGC ATAG
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Protein sequence | MKLMLRSYSN LLLSVRRVTQ ENQGIRRMGR DAQTAKTSVE KVKLVKEMLT YRLWQAKPAK RVYIPKANRQ QGPLGIPTVK NRVAQAVVKN GLEPIWDAEF ETNSYGFHPG RSCHDPLEQF WIRLQKGKDT WILDVDIKQD FDNITHEYIL KAIGEIPGRE LIKQWLKAGY LEAEVFHKTE GGTSSRGIIS PLLANIAFDG MERLLARYKT VKTYQCTRPT TDEEYTKKKK LDKYGFIRYA DDFIITARSE EDIKAIIPTI EKWLSERGLE LNKDKTNLVH IEQGFNFLGF NVRQFNGSCF IVPQKEKVKE FLTLIRGWLK AHPTSTQEAV IANLNSIIRG WGNYYRHGVS QRIFSYVDHE IWKSLWQWSL RRHSKRVGKQ KGKGKEWVRK KYFKTVNGNK WTFATNISNR YGKKETIAIC RLGKVPIQRH VKIKGTA
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