| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_4716 |
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| Symbol | ispF |
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| ID | 4246370 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Trichodesmium erythraeum IMS101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008312 |
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| Strand | + |
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| Start bp | 7237321 |
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| End bp | 7237818 |
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| Gene Length | 498 bp |
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| Protein Length | 165 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638109576 |
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| Product | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase |
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| Protein accession | YP_724152 |
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| Protein GI | 113478091 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0245] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase |
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| TIGRFAM ID | [TIGR00151] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.625161 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAACGTTC GTATAGGTAA TGGCTACGAT ATTCATAAAT TAGGGCCAGA AAGACCATTG
ATTTTGGGAG GAATTAAAAT TGACCATGAA ATGGGGCTGA TTGGCCATAG TGATGCGGAT
GTTCTGACTC ATGCTATTAT GGATGCAATG TTAGGGGCTC TAAGTTTGGG AGATATTGGC
CATTATTTCC CTCCCAGCGA TCCACAATGG GCTGGGGCTG ATAGTATAGA TTTATTGAAG
CGTGTTAATG ATTTAGTTAG GGGTGTTTGC TGGCGAATTA GTAATATTGA CTCGGTAGTG
GTGGCAGAGC GTCCTAAGTT GAAACCACAT ATAGAGAAAA TGCGATCGCG CTTGGCTACT
ACTTTAGAGC TAGAAGCAGA TCAGGTTAGT ATTAAAGCTA CTACTAATGA AAAATTAGGT
CCTGTGGGCA GAGAAGAAGG TATTGCTGCT TATGCGGTGG TTTTGCTACA GAAATATACT
GAGATCAGAA AAGCATAA
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| Protein sequence | MNVRIGNGYD IHKLGPERPL ILGGIKIDHE MGLIGHSDAD VLTHAIMDAM LGALSLGDIG
HYFPPSDPQW AGADSIDLLK RVNDLVRGVC WRISNIDSVV VAERPKLKPH IEKMRSRLAT
TLELEADQVS IKATTNEKLG PVGREEGIAA YAVVLLQKYT EIRKA
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