Gene Tery_4702 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_4702 
Symbol 
ID4246356 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp7225720 
End bp7226028 
Gene Length309 bp 
Protein Length102 aa 
Translation table11 
GC content42% 
IMG OID638109562 
ProductRNA-binding region RNP-1 
Protein accessionYP_724138 
Protein GI113478077 
COG category[R] General function prediction only 
COG ID[COG0724] RNA-binding proteins (RRM domain) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000166798 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.614105 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAATTT ATGTAGGTAA CTTATCCTAC GATGTCACAC AAGATGACTT AAGCGAGGTT 
TTTGCAGAAT ATGGTACTGT CAAGCGGGTT CAGTTACCAA CTGACCGAGA GACAGGGCGT
CCCCGTGGCT TTGGATTTGT AGAAATGAGC AGTGAAAATG AAGAACAGAA AGCTATTGAA
GCACTTGATG GTGCTGAATG GATGGGTCGT GATATAAAGG TTAATAAGGC TAAGCCTCGT
GAAGATCGTG GTTCTGGTGG TAATCGGCGC AATAGTCCTA ATTATTCACG AGGAGGTAAA
TTTCAATAA
 
Protein sequence
MSIYVGNLSY DVTQDDLSEV FAEYGTVKRV QLPTDRETGR PRGFGFVEMS SENEEQKAIE 
ALDGAEWMGR DIKVNKAKPR EDRGSGGNRR NSPNYSRGGK FQ