Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_4702 |
Symbol | |
ID | 4246356 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | - |
Start bp | 7225720 |
End bp | 7226028 |
Gene Length | 309 bp |
Protein Length | 102 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 638109562 |
Product | RNA-binding region RNP-1 |
Protein accession | YP_724138 |
Protein GI | 113478077 |
COG category | [R] General function prediction only |
COG ID | [COG0724] RNA-binding proteins (RRM domain) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.000166798 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.614105 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCAATTT ATGTAGGTAA CTTATCCTAC GATGTCACAC AAGATGACTT AAGCGAGGTT TTTGCAGAAT ATGGTACTGT CAAGCGGGTT CAGTTACCAA CTGACCGAGA GACAGGGCGT CCCCGTGGCT TTGGATTTGT AGAAATGAGC AGTGAAAATG AAGAACAGAA AGCTATTGAA GCACTTGATG GTGCTGAATG GATGGGTCGT GATATAAAGG TTAATAAGGC TAAGCCTCGT GAAGATCGTG GTTCTGGTGG TAATCGGCGC AATAGTCCTA ATTATTCACG AGGAGGTAAA TTTCAATAA
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Protein sequence | MSIYVGNLSY DVTQDDLSEV FAEYGTVKRV QLPTDRETGR PRGFGFVEMS SENEEQKAIE ALDGAEWMGR DIKVNKAKPR EDRGSGGNRR NSPNYSRGGK FQ
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