Gene Tery_4699 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_4699 
Symbol 
ID4246353 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp7219548 
End bp7220354 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content32% 
IMG OID638109559 
Productpeptidase M15B and M15C, D,D-carboxypeptidase VanY/endolysins 
Protein accessionYP_724135 
Protein GI113478074 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1876] D-alanyl-D-alanine carboxypeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.971222 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAAAATA AAGGTCTGTC AAAAAATTTA TTATTAGTTC AGGAAACTGT TACGGATGAA 
GTTCCAGAAG CAGTGCGAGA TCCTCAAAAG GATGAAGAAA TTATCCCAAA TCAAACTAAC
AACAAAAAAT GGATTTGGAG TTGGGTGGGA GTGATTTTTT TGGTGGGAGT AGTTAATCTA
GGGTTACGAA TTCAATCTAA TCTTAAGCAA GTCAATGCTT CATTACTTCA AACTGAAACT
GATAGTATTA AGGCGCCTAA TTCTTCTATG GAAGAATCTC CTATAATTGA AATAGAGAAA
AGTCCTTTTG CAGATTTGCC TTATTCACAA ATAGTAGAAA CAGAATTAGC ATATATAGCT
GTTGATAGTG ATGTTAGATT GCAATTTAAT GCAGCAAAAA AGTTTCAAGA AATGCTTTAT
GCTGCTAGAA ATGATGGTAT TAATTTAGTG GCTTTGAAAG GATTTCAGTC TAAATCAGAT
TTAGAAGCTT TGATCAGCAA TATTAATACT ATTCAGGAAA ATTATACGGA CAAATTTTCA
CCTCTAAGTT CTGGAGAATA TATAACAGGT TATGCTGTTG ATATTGGGGA TAAAAATGCA
CCTGAAACTC ACCAAAATTT AGCTTTTGAA AAGACAGGAG CTTTTCAGTG GCTAAAAAAT
AATGCTGCTT ACTTTAGTTT TGAAATGATG CCTGTTGATT ATGAAAAAGA TGTTGGTTAT
GAACCTTGGC ATTGGCGTTA TGTAGGCAAT CGCGATAGTT TAGAAACTTT TTATAAAAAT
CTACCTAATA CATCTCTAAA TAATTAG
 
Protein sequence
MKNKGLSKNL LLVQETVTDE VPEAVRDPQK DEEIIPNQTN NKKWIWSWVG VIFLVGVVNL 
GLRIQSNLKQ VNASLLQTET DSIKAPNSSM EESPIIEIEK SPFADLPYSQ IVETELAYIA
VDSDVRLQFN AAKKFQEMLY AARNDGINLV ALKGFQSKSD LEALISNINT IQENYTDKFS
PLSSGEYITG YAVDIGDKNA PETHQNLAFE KTGAFQWLKN NAAYFSFEMM PVDYEKDVGY
EPWHWRYVGN RDSLETFYKN LPNTSLNN