| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_4669 |
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| Symbol | psaA |
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| ID | 4246323 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Trichodesmium erythraeum IMS101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008312 |
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| Strand | - |
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| Start bp | 7178626 |
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| End bp | 7180887 |
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| Gene Length | 2262 bp |
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| Protein Length | 753 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638109534 |
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| Product | photosystem I P700 chlorophyll a apoprotein A1 |
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| Protein accession | YP_724110 |
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| Protein GI | 113478049 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01335] photosystem I core protein PsaA |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.33052 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.086374 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCATAA GTCCTCCAGA GCGTGAGGCA AAAGTAAGAG TAACTGTTGA TACTGACCCT
GTACCTACTT CTTTTGAAAA GTGGGGGAAA CCTGGTCACT TCAGTCGGTC TCTAGCCAGA
GGACCAAAAA CCACTACCTG GATTTGGAAC CTCCATGCTG ACGCTCACGA CTTTGATAGT
CACACTTCTG ATTTAGAAGA TGTATCGCGC AAAATCTTCA GCGCACACTT TGGTCACCTG
GCCATAATCT TTGTCTGGTT GAGTGGCGCA TATTTTCATG GCGCTAAATT TTCCAACTAT
GAAGCTTGGT TAGCAGACCC TACAGGAATT AAACCAAGTG CTCAAGTTGT ATGGCCAGTT
TTAGGCCAGG GCATCTTAAA TGGTGATATG GGTGGTGGTT TCCATGGCAT CCAAATTACT
TCCGGATTAT TCCAATTATG GCGCGCTTCT GGCATCACTA ATGAGTACCA ACTATACTGC
ACGGCTATCG GTGGCTTAGT AATGGCAGCC CTGATGATGT TTGCAGGTTG GTTCCATTAT
CATAAGAAAG CACCGAAATT GGAATGGTTC CAGAATGTGG AATCAATGAT GAACCATCAC
TTAGCAGGCT TACTAGGTTT AGGTTGCCTG TCTTGGGCAG GCCACCAGAT TCATGTTTCT
TTGCCTATTA ATAAGTTATT AGATTCTGGG GTAGCACCAG AGGATATTCC TCTACCTCAT
GAATTTCTAT TTAATAAAAG CTTGATGGCA GAGTTGTACC CTAGTTTTGC CAAAGGTTTA
ACCCCATTCT TTACATTGAA TTGGGGTGAA TATGCTGATT TCCTGACCTT TAAAGGTGGT
TTAAACCCTG TAACAGGTGG CTTGTGGTTA TCTGATACAG CTCATCATCA TTTAGCACTA
GCAGTATTAT TCATAGTTGC TGGCCATATG TACCGGACAA ATTGGGGCAT TGGTCACAGC
ATGAAAGAAA TTTTAGAAGC TCATAAAGAT CCACTCATAA TTGGTGGTGA AGGTCATAAA
GGTCTATATG AAGCTTTAAC AACTTCCTGG CACGCCCAGT TAGCAATTAA CTTGGCTATG
CTAGGATCTC TTAGCATCAT TGTGGCACAT CACATGTATG CAATGCCACC GTATCCCTAT
ATTGCGACTG ACTACCCAAC TCAGTTATCT CTGTTCACTC ACCATATGTG GATTGGAGGA
TTCCTGATTG TGGGAGCTGG AGCTCATGGT GCTATTTTTA TGGTGCGGGA TTATGATCCA
GCAAAGAATG TTAACAACGT GTTGGATCGA GTCATTCGTC ACCGGGATGC AATTATCTCT
CACCTGAACT GGGTTTGTAT TTTCCTGGGC TTCCATAGCT TCGGATTATA CGTTCATAAT
GATACTCTGC GGGCTTTAGG TCGTCCCCAG GATATGTTCT CTGATACTGG TATTCAACTA
CAGCCAATCT TTGCTCAGTG GGTACAAAAT CTTCATAGTT TAGCTCCTGG CAATACTGCT
CCTAATGCTT TAGCATCCGT CAGCCCAATT TTTGGTGGCG ATGTATTAGC AGTAGGTGGC
AAAGTGGCAA TGATGCCAAT GACCTTGGGT ACGGCGGACT TTATGGTGCA CCATATCCAT
GCCTTTACAA TCCATGTTAC AGCCCTGATT CTTCTTAAAG GTGTACTGTA TGCTCGTAAC
TCTCGACTAA TTCCAGATAA GAGTGAACTA GGCTTCCGAT TCCCTTGTGA TGGTCCTGGT
CGTGGTGGTA CTTGTCAAGT TTCTGGTTGG GACCATGTAT TCTTGGGTCT TTTCTGGATG
TATAATTCAC TGTCAATTGT GATTTTTCAC TTTAGTTGGA AGATGCAGTC AGATGTCTGG
GGAACAGTAG ATCCAGATGG TACAGTGAGT CACATTACTT ACGGCAACTT TGCCCAAAGT
GCAGTTACTA TCAATGGTTG GTTGCGTGAC TTCTTGTGGG CACAAGCTTC AAACGTAATT
ACATCATACG GTTCAGAATT ATCTGCATAC GGTTTGTTAT TCCTTGGCGC ACACTTTATT
TGGGCATTTA GCTTAATGTT CTTGTTTAGT GGTCGTGGGT ACTGGCAAGA GTTGATAGAG
TCTATAGTTT GGGCTCATAA TAAGTTAAAG GTTGCTCCAG CAATTCAGCC TCGTGCTTTA
AGCATAACCC AGGGTAGAGC AGTAGGAGTA GCTCATTATC TCCTCGGCGG AATTGTCACA
ACCTGGGCAT TCTTCCTAGC TCGAATAATT GCAGTAGGAT AG
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| Protein sequence | MTISPPEREA KVRVTVDTDP VPTSFEKWGK PGHFSRSLAR GPKTTTWIWN LHADAHDFDS
HTSDLEDVSR KIFSAHFGHL AIIFVWLSGA YFHGAKFSNY EAWLADPTGI KPSAQVVWPV
LGQGILNGDM GGGFHGIQIT SGLFQLWRAS GITNEYQLYC TAIGGLVMAA LMMFAGWFHY
HKKAPKLEWF QNVESMMNHH LAGLLGLGCL SWAGHQIHVS LPINKLLDSG VAPEDIPLPH
EFLFNKSLMA ELYPSFAKGL TPFFTLNWGE YADFLTFKGG LNPVTGGLWL SDTAHHHLAL
AVLFIVAGHM YRTNWGIGHS MKEILEAHKD PLIIGGEGHK GLYEALTTSW HAQLAINLAM
LGSLSIIVAH HMYAMPPYPY IATDYPTQLS LFTHHMWIGG FLIVGAGAHG AIFMVRDYDP
AKNVNNVLDR VIRHRDAIIS HLNWVCIFLG FHSFGLYVHN DTLRALGRPQ DMFSDTGIQL
QPIFAQWVQN LHSLAPGNTA PNALASVSPI FGGDVLAVGG KVAMMPMTLG TADFMVHHIH
AFTIHVTALI LLKGVLYARN SRLIPDKSEL GFRFPCDGPG RGGTCQVSGW DHVFLGLFWM
YNSLSIVIFH FSWKMQSDVW GTVDPDGTVS HITYGNFAQS AVTINGWLRD FLWAQASNVI
TSYGSELSAY GLLFLGAHFI WAFSLMFLFS GRGYWQELIE SIVWAHNKLK VAPAIQPRAL
SITQGRAVGV AHYLLGGIVT TWAFFLARII AVG
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