Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_4668 |
Symbol | psaB |
ID | 4246322 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | - |
Start bp | 7176127 |
End bp | 7178343 |
Gene Length | 2217 bp |
Protein Length | 738 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 638109533 |
Product | photosystem I P700 chlorophyll a apoprotein A2 |
Protein accession | YP_724109 |
Protein GI | 113478048 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01336] photosystem I core protein PsaB |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.298458 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.0126467 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAACAA AATTCCCAAA ATTTAGCCAA GACCTGGCAC AAGATCCAAC CACCCGTCGG ATCTGGTATG GAATTGCTAC AGCCCATGAC TTTGAAACCC ACGATGGCAT GACAGAGGAA AATCTTTATC AAAAGATTTT TGCTTCTCAC TTTGGCCATC TAGCAATCAT TTTCCTCTGG ACTTCTGGTA GCCTCTTCCA CGTGGCTTGG CAAGGAAACT TTGAACAGTG GATTAAAGAT CCTCTGAATG TACGTCCCAT CGCTCATGCG ATTTGGGATC CTCAATTTGG TCAAGAGGCC GTAGATGCCT TCACCCAAGC TGGAGCCTCT AATCCAGTAA ATATAGCCTA TTCTGGTGTT TACCATTGGT GGTACACTAT CGGCATGAGA ACAAATGGAG ACTTATATCA GGGTTCTATT TTTCTCCTGA TATTAGCATC CATCATGCTG TTTGCTGGTT GGTTACACCT CCAGCCTAAG TTTAGTCCTA GCCTAGCATG GTTCAAAAAT GCTGAGTCCC GCCTCAATCA CCATTTGGCA GGTCTATTCG GTGTTAGTTC CTTAGCTTGG ACTGGTCACT TGGTTCACGT TGCAATTCCT GAATCTCGTG GACAGCACGT TGGTTGGGAT AACTTCCTGA CGACTATGCC TCACCCAGCA GGTTTAGGTC CCTTCTTTAC AGGAAATTGG GGCGTTTATG CTCAAAATCC TGATACCGTT AACCATGTGT TTGGTACTTC TGAAGGTGCG GGAACTGCAA TTTTGACTTT CTTGGGTGGT TTCCATCCTC AAACTGAGTC CCTGTGGTTG ACTGATATGG CTCATCACCA CTTGGCGATC GCAGTTATCT TCATAATTGC TGGTCATATG TACCGCACTA ACTTTGGTAT TGGTCACAGT ATCAAAGAAA TGCTTGATTC CAAAGCTGGT TTAATTGGTG GAAAAAGTCA AGGTCAGTTT AACTTGCCTC ACCAAGGGTT ATATGAAACT CTAAATAACT CTCTACATTT CCAGTTAGCA TTAGCTCTAG CTTCTCTTGG TGTAATTACT TCCTTGGTAG CACAGCACAT GTATGCTCTG CCTCCTTATG CTTTTATGGC AAGGGATTAC ACTACAATGG CAGCACTTTA CACCCACCAT CAGTATATTG CTGGTTTCAT TATGGTAGGT GCATTTGCTC ATGGTGCGAT TTTCCTAGTA CGGGATTACG ATCCTGAGCA AAATAAAGGT AATGTTCTCG ATCGTGTCTT GAATCACAAA GAGGCTATCA TATCTCACTT GAGTTGGGTT TCTTTATTCT TAGGATTCCA TACTCTAGGT CTTTATGTCC ATAATGATGT AATGGTAGCT TTCGGCACTC CTGAAAAGCA AATCTTGATT GAACCGGTAT TTGCTCAGTT CGTTCAGGCT GCTTCCGGGA AGGCTTTATA TGGCATGGAT GTTCTGTTAT CTAACTCTGA TAGTCTTGCT TCCACTGCTG GTGCTGTATG GTTACCAAAT TGGTTAGAAG CTATCAATAG TGGTACAAAT TCTCTGTTTT TAACCATTGG ACCCGGAGAT TTCTTGGTTC ACCATGCCAT TGCTCTAGGT TTGCATACAA CAACTTTAAT TTTGGTTAAA GGTGCATTGG ATGCTCGTGG TTCTAAGTTA ATGCCAGACA AGAAAGACTT CGGTTATGCA TTCCCTTGTG ATGGCCCTGG TCGTGGTGGT ACTTGCGATA TCTCTGCTTG GGACTCCTTC TATCTAGCTA TGTTCTGGAT GTTAAACACC ATTGGTTGGG TAACATTTTA CTGGCACTGG AAAAACTTGT CTGTATGGCA AGAGAACTTG GCTCAGTTTA ATCAATCTTC TACTTATTTG ATGGGTTGGT TGCGTGATTA TCTGTGGTTG AACTCTTCCC AGTTAATTAA CGGTTATAAC CCTTATGGAA CTAGTAACTT GTCTGTTTGG GCTTGGATGT TCTTATTCGG ACACCTAGTT TGGGCAACTG GTTTCATGTT CCTCATCTCT TGGCGTGGTT ACTGGCAAGA GCTAATCGAA ACTATTGTTT GGGCACATGA GCGTACTCCT CTAGCTAACT TGGTTCGCTG GAAAGATAAG CCTGTTGCTC TTTCTATTGT TCAAGCTCGT GTTGTTGGCT TAGCTCACTT TACTATTGGC TATGTTCTGA CTTACGCCGC ATTTTTGATA GCTTCTACTG CTGGTAAGTT TGGTTAA
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Protein sequence | MATKFPKFSQ DLAQDPTTRR IWYGIATAHD FETHDGMTEE NLYQKIFASH FGHLAIIFLW TSGSLFHVAW QGNFEQWIKD PLNVRPIAHA IWDPQFGQEA VDAFTQAGAS NPVNIAYSGV YHWWYTIGMR TNGDLYQGSI FLLILASIML FAGWLHLQPK FSPSLAWFKN AESRLNHHLA GLFGVSSLAW TGHLVHVAIP ESRGQHVGWD NFLTTMPHPA GLGPFFTGNW GVYAQNPDTV NHVFGTSEGA GTAILTFLGG FHPQTESLWL TDMAHHHLAI AVIFIIAGHM YRTNFGIGHS IKEMLDSKAG LIGGKSQGQF NLPHQGLYET LNNSLHFQLA LALASLGVIT SLVAQHMYAL PPYAFMARDY TTMAALYTHH QYIAGFIMVG AFAHGAIFLV RDYDPEQNKG NVLDRVLNHK EAIISHLSWV SLFLGFHTLG LYVHNDVMVA FGTPEKQILI EPVFAQFVQA ASGKALYGMD VLLSNSDSLA STAGAVWLPN WLEAINSGTN SLFLTIGPGD FLVHHAIALG LHTTTLILVK GALDARGSKL MPDKKDFGYA FPCDGPGRGG TCDISAWDSF YLAMFWMLNT IGWVTFYWHW KNLSVWQENL AQFNQSSTYL MGWLRDYLWL NSSQLINGYN PYGTSNLSVW AWMFLFGHLV WATGFMFLIS WRGYWQELIE TIVWAHERTP LANLVRWKDK PVALSIVQAR VVGLAHFTIG YVLTYAAFLI ASTAGKFG
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