| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_4668 |
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| Symbol | psaB |
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| ID | 4246322 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Trichodesmium erythraeum IMS101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008312 |
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| Strand | - |
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| Start bp | 7176127 |
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| End bp | 7178343 |
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| Gene Length | 2217 bp |
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| Protein Length | 738 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638109533 |
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| Product | photosystem I P700 chlorophyll a apoprotein A2 |
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| Protein accession | YP_724109 |
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| Protein GI | 113478048 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01336] photosystem I core protein PsaB |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.298458 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.0126467 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCAACAA AATTCCCAAA ATTTAGCCAA GACCTGGCAC AAGATCCAAC CACCCGTCGG
ATCTGGTATG GAATTGCTAC AGCCCATGAC TTTGAAACCC ACGATGGCAT GACAGAGGAA
AATCTTTATC AAAAGATTTT TGCTTCTCAC TTTGGCCATC TAGCAATCAT TTTCCTCTGG
ACTTCTGGTA GCCTCTTCCA CGTGGCTTGG CAAGGAAACT TTGAACAGTG GATTAAAGAT
CCTCTGAATG TACGTCCCAT CGCTCATGCG ATTTGGGATC CTCAATTTGG TCAAGAGGCC
GTAGATGCCT TCACCCAAGC TGGAGCCTCT AATCCAGTAA ATATAGCCTA TTCTGGTGTT
TACCATTGGT GGTACACTAT CGGCATGAGA ACAAATGGAG ACTTATATCA GGGTTCTATT
TTTCTCCTGA TATTAGCATC CATCATGCTG TTTGCTGGTT GGTTACACCT CCAGCCTAAG
TTTAGTCCTA GCCTAGCATG GTTCAAAAAT GCTGAGTCCC GCCTCAATCA CCATTTGGCA
GGTCTATTCG GTGTTAGTTC CTTAGCTTGG ACTGGTCACT TGGTTCACGT TGCAATTCCT
GAATCTCGTG GACAGCACGT TGGTTGGGAT AACTTCCTGA CGACTATGCC TCACCCAGCA
GGTTTAGGTC CCTTCTTTAC AGGAAATTGG GGCGTTTATG CTCAAAATCC TGATACCGTT
AACCATGTGT TTGGTACTTC TGAAGGTGCG GGAACTGCAA TTTTGACTTT CTTGGGTGGT
TTCCATCCTC AAACTGAGTC CCTGTGGTTG ACTGATATGG CTCATCACCA CTTGGCGATC
GCAGTTATCT TCATAATTGC TGGTCATATG TACCGCACTA ACTTTGGTAT TGGTCACAGT
ATCAAAGAAA TGCTTGATTC CAAAGCTGGT TTAATTGGTG GAAAAAGTCA AGGTCAGTTT
AACTTGCCTC ACCAAGGGTT ATATGAAACT CTAAATAACT CTCTACATTT CCAGTTAGCA
TTAGCTCTAG CTTCTCTTGG TGTAATTACT TCCTTGGTAG CACAGCACAT GTATGCTCTG
CCTCCTTATG CTTTTATGGC AAGGGATTAC ACTACAATGG CAGCACTTTA CACCCACCAT
CAGTATATTG CTGGTTTCAT TATGGTAGGT GCATTTGCTC ATGGTGCGAT TTTCCTAGTA
CGGGATTACG ATCCTGAGCA AAATAAAGGT AATGTTCTCG ATCGTGTCTT GAATCACAAA
GAGGCTATCA TATCTCACTT GAGTTGGGTT TCTTTATTCT TAGGATTCCA TACTCTAGGT
CTTTATGTCC ATAATGATGT AATGGTAGCT TTCGGCACTC CTGAAAAGCA AATCTTGATT
GAACCGGTAT TTGCTCAGTT CGTTCAGGCT GCTTCCGGGA AGGCTTTATA TGGCATGGAT
GTTCTGTTAT CTAACTCTGA TAGTCTTGCT TCCACTGCTG GTGCTGTATG GTTACCAAAT
TGGTTAGAAG CTATCAATAG TGGTACAAAT TCTCTGTTTT TAACCATTGG ACCCGGAGAT
TTCTTGGTTC ACCATGCCAT TGCTCTAGGT TTGCATACAA CAACTTTAAT TTTGGTTAAA
GGTGCATTGG ATGCTCGTGG TTCTAAGTTA ATGCCAGACA AGAAAGACTT CGGTTATGCA
TTCCCTTGTG ATGGCCCTGG TCGTGGTGGT ACTTGCGATA TCTCTGCTTG GGACTCCTTC
TATCTAGCTA TGTTCTGGAT GTTAAACACC ATTGGTTGGG TAACATTTTA CTGGCACTGG
AAAAACTTGT CTGTATGGCA AGAGAACTTG GCTCAGTTTA ATCAATCTTC TACTTATTTG
ATGGGTTGGT TGCGTGATTA TCTGTGGTTG AACTCTTCCC AGTTAATTAA CGGTTATAAC
CCTTATGGAA CTAGTAACTT GTCTGTTTGG GCTTGGATGT TCTTATTCGG ACACCTAGTT
TGGGCAACTG GTTTCATGTT CCTCATCTCT TGGCGTGGTT ACTGGCAAGA GCTAATCGAA
ACTATTGTTT GGGCACATGA GCGTACTCCT CTAGCTAACT TGGTTCGCTG GAAAGATAAG
CCTGTTGCTC TTTCTATTGT TCAAGCTCGT GTTGTTGGCT TAGCTCACTT TACTATTGGC
TATGTTCTGA CTTACGCCGC ATTTTTGATA GCTTCTACTG CTGGTAAGTT TGGTTAA
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| Protein sequence | MATKFPKFSQ DLAQDPTTRR IWYGIATAHD FETHDGMTEE NLYQKIFASH FGHLAIIFLW
TSGSLFHVAW QGNFEQWIKD PLNVRPIAHA IWDPQFGQEA VDAFTQAGAS NPVNIAYSGV
YHWWYTIGMR TNGDLYQGSI FLLILASIML FAGWLHLQPK FSPSLAWFKN AESRLNHHLA
GLFGVSSLAW TGHLVHVAIP ESRGQHVGWD NFLTTMPHPA GLGPFFTGNW GVYAQNPDTV
NHVFGTSEGA GTAILTFLGG FHPQTESLWL TDMAHHHLAI AVIFIIAGHM YRTNFGIGHS
IKEMLDSKAG LIGGKSQGQF NLPHQGLYET LNNSLHFQLA LALASLGVIT SLVAQHMYAL
PPYAFMARDY TTMAALYTHH QYIAGFIMVG AFAHGAIFLV RDYDPEQNKG NVLDRVLNHK
EAIISHLSWV SLFLGFHTLG LYVHNDVMVA FGTPEKQILI EPVFAQFVQA ASGKALYGMD
VLLSNSDSLA STAGAVWLPN WLEAINSGTN SLFLTIGPGD FLVHHAIALG LHTTTLILVK
GALDARGSKL MPDKKDFGYA FPCDGPGRGG TCDISAWDSF YLAMFWMLNT IGWVTFYWHW
KNLSVWQENL AQFNQSSTYL MGWLRDYLWL NSSQLINGYN PYGTSNLSVW AWMFLFGHLV
WATGFMFLIS WRGYWQELIE TIVWAHERTP LANLVRWKDK PVALSIVQAR VVGLAHFTIG
YVLTYAAFLI ASTAGKFG
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