Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_4664 |
Symbol | |
ID | 4246318 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | - |
Start bp | 7172676 |
End bp | 7173203 |
Gene Length | 528 bp |
Protein Length | 175 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 638109529 |
Product | ribonucleotide reductase regulator NrdR-like |
Protein accession | YP_724105 |
Protein GI | 113478044 |
COG category | [K] Transcription |
COG ID | [COG1327] Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains |
TIGRFAM ID | [TIGR00244] transcriptional regulator NrdR |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.280022 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.00221105 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
| |
Sequence |
Gene sequence | ATGCTATGTC CAATTTGCCA AGATACAAAT AGTCGTGTTC TAGAATCTCG TTCAGCTGAA TCTGGCAAGA GCATCCGACG TCGGCGAGAA TGTATGAATT GCCAGCATCG TTTCACTACT TATGAGAGAA TAGAGTTTCT GACAATAACA ATAATTAAAA GGGATGGAAA AAAGGAGTCT TTTGACAAGT CGAAATTACT TCGAGGTATT ATTCGTTCCT GTGAAAAAAC TGGTATTGAA GTTAGTCAGC TTGAAGCTTT TGTCAATCAA ATAGAGGTTG AATTACAAGG TAAATGCCAG AGAGAAATTA CTAGTGCTGA GATTGGTGAA ATTGTTCTTA GCAAATTGAG TGGCATTAGT GAAGTTGCCT ATATCCGTTT CGCTTCTGTT TATCGTAAAT TTCAAGGTAT TCGAGATTTT GTAGATACCT TAAATCATCT GCAAAATCAA AAAGAGAATT TAGAGTTTAC TGCGACTGTG CCACAAAATT CTGAAATTTC TCTACAACAA GATGTAATTA ATGTGTAA
|
Protein sequence | MLCPICQDTN SRVLESRSAE SGKSIRRRRE CMNCQHRFTT YERIEFLTIT IIKRDGKKES FDKSKLLRGI IRSCEKTGIE VSQLEAFVNQ IEVELQGKCQ REITSAEIGE IVLSKLSGIS EVAYIRFASV YRKFQGIRDF VDTLNHLQNQ KENLEFTATV PQNSEISLQQ DVINV
|
| |