Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_4649 |
Symbol | |
ID | 4246303 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | + |
Start bp | 7148647 |
End bp | 7150752 |
Gene Length | 2106 bp |
Protein Length | 701 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 638109516 |
Product | oligopeptidase A |
Protein accession | YP_724092 |
Protein GI | 113478031 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0339] Zn-dependent oligopeptidases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.621087 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.228337 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCCCTA ATACAACAGT TACAAAAAAA ACATTACTAA TTGGTAAGGG ATTACCCCCT TTTGAATCTA TAAAACCAGA AGATGTAGTA CCCGCAATAA CAGAATTACT GACAGAATTA GAAAAAGAAC TAATCAACTT AGAATTAATA GTTAAACCAA CTTGGAATGA CCTAGTAGAA CCTCTACAAA AATTAGAAGA TCGTTTAACC TGGAGTTGGG GAATAGTAGG ACATTTAATG GGAGTTAAAA ATAATCCTGA ACTACGAAAA GCTTATGATC AAGTACAACC CAAAATAGTA GAGTTTATTA ATAAACTAAA TCAAAGTAAA CCTCTTTATC AAACCTTTAA AAATTTAAGT AATAGTGATA GCTGGCAAAA CCTAGATTCA GGACAAAAAC GTATAGTTGA AGCTGCCATC AAAGATGCAG AACTTTCAGG AGTAGGTTTA AAAGGAGAAA AACGAGAACA CTTCAATGCT ATTGAACTAG AACTAGCAGA ACTTTCTACT AAATTTTCTA ATAATGTTCT TGATGCTACC AAAGCTTTTA GCCTAATTTT AACTGAAAAA GAAGAAGTAG ACGGTTTACC ACCCAGTTTG TTAAGTCTAG CTGCTCAAGC TGCCAGAGAT AATGGATCCG AGAATGCTAC ACCAGAAAAC GGACCTTGGC GGATAACCCT CGACTCTCCC AGTTTTTTAC CCTTCATGCA ACACTGCAAA AGACGGCAGT TGCGAGAACA ACTTTATAAA GCCTTTATTA GTCGTGCTTC TAGTGAGAAG TTAAACAACT ATCCTTTAAT TGAACGTATT CTGGAGCTAC GTCAGCAAAA AACAGAAATT TTGGGCTTTA ATAGTTATGC AGAATTGAGT CTTGCCAGTA AAATGGCTCC TAGTGTGGAA GCAGTAGAAA AGTTATTAGA AGAATTACGC AGTGTTAGTT ATGATGCTGC AGTTAAAGAC TTAGAAGAAC TAAAACAGTT TGCTGCCAGC CAAAATGCAC CAGAGGCCAA GGAGTTTAAA CCCTGGGATA TGAGCTTTTG GTCAGAAAGA CTGCGAGAAG AAAAATTTTC CTTTACTACA GAAGAGTTGC GACCATATTT CCCCCTGCCA CAGGTTCTTG ATGGGTTATT TAGTTTAGTC AAGCGTATAT TTGGCATTAA TATTACTGCC GCAGATGGGG AAGCTCCAGT ATGGCATGAA GATGTGCGCT ATTTTAAAAT TAGTGATGAA ACAAACAGAC CCATTGCCTA TTTTTACCTT GATGCTTATA GTCGTCCTGC TGAAAAACGA GGTGGTGCAT GGATGGATGA CTGTATAAAT CGTGCTAAAA TTGTAGAGAA TGGTCAAACT ACTTTGCGTT TACCTGTAGC TTATTTACAA TGTAATCAAA CACCGCCTGT AGATGGTAAA CCTAGTTTGA TGAATTTTAG TGAGGTAGAA ACTCTGTTCC ATGAATTTGG ACATGGTTTA CAACATATGC TGACAACAGT TGACTATGGA GGTGCTTCAG GTATTAATAA CGTAGAGTGG GATGCGGTAG AGTTACCTAG TCAGTTTATG GAAAATTGGT GTTATGACCG CTCCACTTTA TTCGGAATGG CGAAACATTA TGAAACAGGG GAGGTTTTGC CAGAACATTA TTATCAGAAA CTTTTGGCTG CTAGAAATTA TATGAGCGGT AGTGCGATGT TGCGCCAGTT GCATTTTGCT TTAGTTGATA TTGAGCTCCA TCACCGTTAT CGACCAGCTG GGGAAGAAAC AGTGCTAGAT GTGCGTAAGC GTGTTGCTGA AACTACTACT GTTTTGGAAC TATTGCCAGA AGACTCATTT TTATGTGCAT TTGGGCATAT TTTTGCTGGT GGTTATGCTG CCGGTTATTA TAGTTATAAG TGGGCGGAGG TATTGAGTGC TGATGCTTTT GCCGCTTTTG AAGAGGCTGG TTTGGAAAAT GAACAGGCGA TCGCTACTTG TGGTCAGCAG TTTAGGGATA CAGTTTTAGC TTTGGGCGGG AGTCTGCATC CGATGGAGGT ATTTAAAACT TTCCGAGGTC GAGAACCTAG TACTGAACCT TTGTTAAGGC ATAGTGGTTT GGTAGCTACA GCTTAA
|
Protein sequence | MSPNTTVTKK TLLIGKGLPP FESIKPEDVV PAITELLTEL EKELINLELI VKPTWNDLVE PLQKLEDRLT WSWGIVGHLM GVKNNPELRK AYDQVQPKIV EFINKLNQSK PLYQTFKNLS NSDSWQNLDS GQKRIVEAAI KDAELSGVGL KGEKREHFNA IELELAELST KFSNNVLDAT KAFSLILTEK EEVDGLPPSL LSLAAQAARD NGSENATPEN GPWRITLDSP SFLPFMQHCK RRQLREQLYK AFISRASSEK LNNYPLIERI LELRQQKTEI LGFNSYAELS LASKMAPSVE AVEKLLEELR SVSYDAAVKD LEELKQFAAS QNAPEAKEFK PWDMSFWSER LREEKFSFTT EELRPYFPLP QVLDGLFSLV KRIFGINITA ADGEAPVWHE DVRYFKISDE TNRPIAYFYL DAYSRPAEKR GGAWMDDCIN RAKIVENGQT TLRLPVAYLQ CNQTPPVDGK PSLMNFSEVE TLFHEFGHGL QHMLTTVDYG GASGINNVEW DAVELPSQFM ENWCYDRSTL FGMAKHYETG EVLPEHYYQK LLAARNYMSG SAMLRQLHFA LVDIELHHRY RPAGEETVLD VRKRVAETTT VLELLPEDSF LCAFGHIFAG GYAAGYYSYK WAEVLSADAF AAFEEAGLEN EQAIATCGQQ FRDTVLALGG SLHPMEVFKT FRGREPSTEP LLRHSGLVAT A
|
| |