Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_4630 |
Symbol | |
ID | 4246284 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | + |
Start bp | 7118189 |
End bp | 7119121 |
Gene Length | 933 bp |
Protein Length | 310 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 638109499 |
Product | NAD-dependent epimerase/dehydratase |
Protein accession | YP_724075 |
Protein GI | 113478014 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.01826 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGAATAT TGATTATGGG TGGTACCCGA TTCATTGGGG TATATTTAAC TAAAATTTTG GTAGAAAAAG GGCATGAAGT TGTATTATTT AATCGCGGAA ATAAACCAGC TCCAGTCTCA GGAATTAAAG AAATTTATGG GGATAGGACT GATATTAATC AACTCAAAGA AAAGTTAGCA TCAGAAAAAT TTGATGCTAT TTTTGATAAT AACGGACGAA AATTAAGTGA CACAAAACCT CTAGCAGAAA TCTTTAAAGG TCAAGTCAAA CATTTCGTCT ATATGAGTTC TGCCGGAGTT TATTTAAAGT CTGACCAAAT GCCTCATATT GAAGGAGATA CTATAGATCC AAAAAGTCGT CATTTAGGAA AATATGAAAC AGAAACAGAA TTAGCAAATC AAGGTTTACC CTGGACTTCT ATTCGCCCTA CTTATATTTA TGGACCACAA AATTATAATG ATTTAGAAGC ATGGTTTTTT GACAGAATTG TACGCGATCG CCCAATTCCT ATTCCTGGTA ATGGACTTCA TATTACTCAA TTAGGTCATG TCAAAGATTT AGCAATGGCA ATGGTAAATA TTTTAGGAAA TGACAAAGCA ATTGGGCAAA TTTATAATAT TTCTGGAGAA CGTTTTATCA CCTTTGATGG TTTAGCCCGC TCCTGTGCTG AAGCCACTGG AAAATCTCCT GATTCTATTA AGTTAGTACA TTACGACCCG AAGAAATTTG ACTTTGGAAA AAAGAAAGCT TTTCCATTAC GAATGCAACA TTTTTTTGCC AGTATAAATA AAGCAATAAC TGAATTAAAT TGGCAACCAA AATATGACTT AATTTCTGGA TTAAAAGATT CATTTGAAAA TGACTTTATA GCATCTGGTC GTGCTCAAGC AGAAGTAGAT TTTTCCATTG ATGATGAAAT TTTGAAAGTG TAA
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Protein sequence | MRILIMGGTR FIGVYLTKIL VEKGHEVVLF NRGNKPAPVS GIKEIYGDRT DINQLKEKLA SEKFDAIFDN NGRKLSDTKP LAEIFKGQVK HFVYMSSAGV YLKSDQMPHI EGDTIDPKSR HLGKYETETE LANQGLPWTS IRPTYIYGPQ NYNDLEAWFF DRIVRDRPIP IPGNGLHITQ LGHVKDLAMA MVNILGNDKA IGQIYNISGE RFITFDGLAR SCAEATGKSP DSIKLVHYDP KKFDFGKKKA FPLRMQHFFA SINKAITELN WQPKYDLISG LKDSFENDFI ASGRAQAEVD FSIDDEILKV
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