Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_4626 |
Symbol | |
ID | 4246280 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | - |
Start bp | 7112497 |
End bp | 7113855 |
Gene Length | 1359 bp |
Protein Length | 452 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 638109495 |
Product | TPR repeat-containing protein |
Protein accession | YP_724071 |
Protein GI | 113478010 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3063] Tfp pilus assembly protein PilF |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAATAA TTAAAGGGAA CAGGGTTAAG GAACTCAGAA ATTTTTTTTG TAATCAGAGT TTGATAATTT CTCGAAAAAA AATTGGCTGG AAAATTTGGG GTTTTAGACC TAATGATAAT TATTTTGAGA AGGGTTATAA GGGTTTTACT CTGAGTTTGC TTAGGTTAGT TTCTACTCTA ATTTTAACTG TTATAGTTTC TATGAGTGAC AGTATTGCTT ATGGTCAAAA TCAAAGTTTT GATAATTATC AAAAAAGAAA ATCTTTGATT TTTTTGAGTC AAAACCAAGA ACAAGTTGAA GATTTTAAAC TAAGAGAAGA AATTCGCGAT GGTGTCCGAG AGGAGGTAGA TTATACTTTT CGTCATGCTA TGTCATTACT TAGTGTTTTT CTAATTGTTT TGACTTTTTT CCCGGCTTCA GCGGCAGTTT GGATTTGGTT TCTTCAGGCA AAGTTAGCTC ACAAAGTTGA TGTTACAAAA CAAGAGATTG ATAGTTTTAA ATATGATACA GTATCTCAAC TTAAACAAAT TATTGTTGAT ACTCAGGTTA TTTTAGATGA ATTGAGGGTA GAAAGTGGCA AGGCTGAGGA AAAAATTGAA CAACTTCAAC AGGATACTTT GATTCAATTT TCTTCTGAAC AAGGTGATAA TTCTGAGCCT TTAATGATGG CGAAAGACTA TGCAAAAAAA GCTGATACTT TTTTCTTTTC GGGTCAGTTT AAGGAGGCTA TTAATGCTTA TAATCAAGCT TTAAAAATTC ATCCAAAAAT GGCGGATGTT TGGAATAATC GGGGTGTGGC TTTGACAAGA TTAAAGATAT TTGATGAGGC AATTTCTTCT TATGATCGAG CTTTACAAAT TCGGGCTGAT TATGCGGATG CTTGGAATAA TAGGGGTGTT TGTTTGATAG AATTGCAGCA TTATCAAGAG GCAATTAATT CTTTTGAGCA AGGAATTAAG GTTAAACCTG ATTATGCAGA TGCTTGGAAT AATAGGGGTG TTTGTTTGGC AAAAATTCAA AAATATCAGG AGGCAGTTAA GTCTTATAAT CAGGCAATTG CTATTAAAAA TGATTATGGT GATGCTTGGA ATAATCGCGG TGCTTGTTTG ATGAAGTTGG GAATTTATGG AGAGGCGATC GCTTGTTTTG ATAATGCTGT AAAGATTCAA CCTGACTTTT TTAGTGCTTG GTATAATCAG GCTCGTTGTT ATAGTTTAAA GGGTGATGTT GATATGGCTT TAAAAAGTTT TGAAAAGGCT GTTAGTTTGA ATGGTAAAAA GTCTCAAAAG ATGGCAAAAA ATGAACCTGA TTTTGATAAT ATTCGGGACC ATGAATTGTT TCAGAAGTTG ATAGTTTGA
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Protein sequence | MKIIKGNRVK ELRNFFCNQS LIISRKKIGW KIWGFRPNDN YFEKGYKGFT LSLLRLVSTL ILTVIVSMSD SIAYGQNQSF DNYQKRKSLI FLSQNQEQVE DFKLREEIRD GVREEVDYTF RHAMSLLSVF LIVLTFFPAS AAVWIWFLQA KLAHKVDVTK QEIDSFKYDT VSQLKQIIVD TQVILDELRV ESGKAEEKIE QLQQDTLIQF SSEQGDNSEP LMMAKDYAKK ADTFFFSGQF KEAINAYNQA LKIHPKMADV WNNRGVALTR LKIFDEAISS YDRALQIRAD YADAWNNRGV CLIELQHYQE AINSFEQGIK VKPDYADAWN NRGVCLAKIQ KYQEAVKSYN QAIAIKNDYG DAWNNRGACL MKLGIYGEAI ACFDNAVKIQ PDFFSAWYNQ ARCYSLKGDV DMALKSFEKA VSLNGKKSQK MAKNEPDFDN IRDHELFQKL IV
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