Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_4625 |
Symbol | |
ID | 4246279 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | + |
Start bp | 7107744 |
End bp | 7112276 |
Gene Length | 4533 bp |
Protein Length | 1510 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 638109494 |
Product | WD-40 repeat-containing protein |
Protein accession | YP_724070 |
Protein GI | 113478009 |
COG category | [R] General function prediction only |
COG ID | [COG2319] FOG: WD40 repeat |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGAGAA AATATTTAAG GGAAGCTTTA GTAGTTGGAG TTAACCGTTA TCCTATGTTG AAAAATAAAA AAGTAGGAGA TTCGAACCTT AAGGCTGCTG CTAAGGATGC TGAAGCTATT GCTAATATGT TGGAAAAATA TGGTAAATTT CGAGTTCAAC GTTTGCCAAA AAAATATGAT GAGGAAGGTA AAGAAACTTG TGACCATGAG GGAATAGTTA AGGTTGATGA TCTTAAAAAA GCAATTATTA ATCTATTTAC ACCTCCTGGA AAAAATGAAA CTCCTGATGT GGCTTTACTG TTTTTTGCCG GGCATGGTTA TGTTAATATA GAAGAAGATA TTCGAGAGGG TTTTTTGGCT ACTAGTGATG CTAAGTTTGC GAAAAAGCTC TCGAATAATG AAGATATTTT TGGTGTTCCT TTAAGTTGGT TAAAGGATTT ATTGCAAAAG AGTCAGGTTC AAAAACAAAT TGTTTGGTTA GATTGTTGTT TTAGTGGTGA ATTATTGAAT TTTGACGGGG TAGCTAACCT CAATACTCAA GAAAAAAAGG TCAGTCGCTG TTTTATTACT GCTTCTCGTT CTTTTCAAAC TGCTACAGAA AAAATTGATG GAGAACATGG TTTATTTACT GATAATTTGC TGGAATGTTT AAACCCAGAA AATTATGTTG ATGGTTGGGT AGATAATCAT GTTTTGACGG AATCTATTCA AGAAAAGATG TCTCAGACAT CTCAAGCACC TATGTGTGAT AATTCCGGGG ATACAATTAT TCTGACTACT AATAGTCTGA ATGAACCTCT GGATGAACGT TGGAAAAATG ATCCTCCTTA TCGGGGTTTA TCTTATTTTC GGCAGCAGGA GAATGATGGG GTATTTTTTC ATGGTAGAAC TTCGTTAACT GATAAGTTAA TTGAGCTAGT AAAAGATAAT AATTTTGTGG CGGTTTTGGG GGCTTCCGGG AGTGGGAAAT CTTCTTTGTT ACGGGCGGGT TTGTTATATC AATTGAAGCG GGGGCAGAAA ATATCGGGAA GTGATAGATG GTTTTATATT GCTCCTTTTA CTCCGGAGGA GTCTCCTCTG AAAAGTCTGC TGAAAAGTCT GGGGAAAAGT CTGGGGGAAA TTAAGATTAA GGGGGAAAAA GTTGAAGGTT TAATTCAGTT TGTTGATCAA ACAGAGGCGG AACAAACAGA GGGGAAAAAG GTCGATTTTT TAACTAAGGA ATTAATTGAA GAGAAATTAA TTGAGTTTAT TGATGTGGTT GAGGCGGAAA GAGTAATTAT GGTGATGGAC CAATTTGAAG AGTCTTTTAC TCTCTGTAAA ACTCACGAAG AACGACTGGA TTTTTTTGAT TGTTTTTTGG CTGTTTTGGA AAGGCGAGGT GAGAAGTTTT GTGTGGTGTT GGGAATACGG GCTGATTTTC TGGGCCGCTG TTCTGAATAT GGAGGGTTGG CCAATAAAAT TCAGGGACAT CAATTATTAG TTACTCCTCT GGACGAGGGT GAAATAGAGG AGGTGATCAA AAAACCGGCG AAATTAGTGG GTATGGATGT TGAGCCCAAC TTGGTTGCCA AAATGAGGGA AGATTTTTTG CGTAACCCTG GTAGTTTACC TCTGCTGGAA TATACTTTGG ATGCTCTGTG GAGTTTTGCG ACTCAAGGGG AGAATAAAAG TCCATATTTA ACTCTGGAAA ATTATACAAG TTTGGGTGAA ATAGAGGGTG CTTTGACGAA GCGAGCTGAT GCGGTTTTTG AGAGTTTGAA TGATGAGGAA AAGTCGGTGG CAAAGAGGAT ATTTTTAGAG TTGGTTCAGC CTGGGGAAGG GAAAATAAGT CCGGGGAAAA TAACGGATAC TCGGCGGCGG GTAATTTTGG AAAAGTTGCC TAATGAACGA CATAGTTTAG AGCTTTTGTC TGCAGTTAGT GATAGGTTGG CTGACAAAAA TAACAGGTTA ATGACTAAGG ATAGGTCGGA GGCGGGAATA TTATTGGATA TTGTTCATGA GGACTTAATT AGAAGTTGGA AAACTTTGAG GAAATGGGTG GAGGAATATC AAGAGGCTTT GCCGGTGGAA AGAAAAATTG AGGCTGATGC GGCTGACTGG GAAAAAGAGG GGAAAAGTGA GAATTTGTTG TTACGAGCTG GTCGGTTAAC TAAGGCGGAA GAATATCTGG AAAATTATGG TGAAATGGCT TTATTGGATG GGTTGGCTTA TGAGTTTATT GAGGCGAGTC GGGAGTTGAA AATTCGTGAG GAAGAAAAAG AGAAGGAGCG GCAAAGAAAA GAGAAGGAGC GGCAAAGAAA AGTAGAGGAA CAAGCAGCAA GAATATTAGG AATGCTTTCT GACTCAATGA TCAGACAAAA GCTATCTTTA CTTGATAAAG GTGTATTACT GAGCGTGGAG TCAATGAAGC AATACTTTGA TATCAAAAAA CGTTATGGAA AAGCTGACTC GGGCCTACTT GTTGAACTGG ATCAAACTCT ACGGAATGGA GTAAGTCAAC TACCCAAGCA TCTCTATACT CTCAAACACC AGTCCGATGT ATATGCAGTA GCCTTTAGCC CCGACGGCAA AACCATTGCA ACTGCAAGTT TAGACAAAAC CGCCCGCCTC TGGGATACTG AGAATGGCAA TGTATTAGCT ACTCTCAACC ACCAGTCCTC GGTAAATGCA GTAGCCTTTA GCCCCGACGG CAAAACCATT GCAACTGCAA GTTATGACAA AACCGCCCGC CTCTGGGATA CTGAGAATGG CAAAGAATTA GCTACTCTCA ACCACCAGGA CTGGGTAAAT GCAGTAGCCT TTAGCCCCGA CGGCAAAACC ATTGCTACTG CAAGTTATGA CAAAACCGCC CGCCTCTGGG ATACTGAGAA TGGCAAAGAA TTAGCTACTC TCAACCACCA GTCCTCGGTA ATAGCAGTAG CCTTTAGCCC CGACGGCAAA ACCATTGCTA CTGCAAGTTC TGACAAAACC GCCCGCCTCT GGGATACTGA GAATGGCAAT GTATTAGCTA CTCTCAACCA CCAGGACTGG GTAATAGCAG TAGCCTTTAG CCCCGACGGC AAAACCATTG CAACTGCAAG TTCTGACAAA ACCGCCCGCC TCTGGGATAC TGAGAATGGC AAAGTATTAG CTACTCTCAA CCACCAGTCC TCGGTAAATG CAGTAGCCTT TAGCCCCGAC GGCAAAACCA TTGCAACTGC AAGTTCTGAC AAAACCGCCC GCCTCTGGGA TACTGAGAAT GGCAAAGTAT TAGCTACTCT CAACCACCAG TCCTCGGTAA GAGCAGTAGC CTTTAGCCCG GACGGCAAAA CCATTGCAAC TGCAAGTTAT GACAAAACCG CCCGCCTCTG GGATACTGAG AATGGCAATG TATTAGCTAC TCTACTCCAC CAGGACTTGG TAATAGCAGT AGCCTTTAGC CCCGACGGCA AAACCATTGC TACTGCTAGC TGGGACAAAA CCGCCCGCCT CTGGGATACT GAGAATGGCA AAGTATTAGC TACTCTCAAC CACCAGTCCT CGGTAAGAGC AGTAGCCTTT AGCCCGGACG GCAAAACCAT TGCAACTGCA AGTTCTGACA AAACCGCCCG CCTCTGGGAT ACTGAGAATG GCAAAGTATT AGCTACTCTC AACCACCAGT CCTCGGTAAA TGCAGTAGCC TTTAGCCCCG ACGGCAAAAC CATTGCAACT GCAAGTTCTG ACAAAACCGC CCGCCTCTGG GATACTGAGA ATGGCAAAGT ATTAGCTACT CTCAACCACC AGTCCTCGGT AAGAGCAGTA GCCTTTAGCC CGGACGGCAA AACCATTGCA ACTGCAAGTT CTGACAAAAC CGCCCGCCTC TGGGATACTG AGAATGGCAA AGTATTAGCT ACTCTCAACC ACCAGTCCAG GGTATTTGCA GTAGCCTTTA GCCCCGACGG CAAAACCATT GCTACTGCAA GTTCTGACAA AACCGCCCGC CTCTGGGATA CTGAGAATGG CAATGTATTA GCTACTCTCA ACCACCAGTT CTGGGTAAAT GCAGTAGCCT TTAGCCCCGA CGGCAAAACC ATTGCAACTG CAAGTTCTGA CAAAACCGCC CGCCTCTGGG ATACTGAGAA TGGCAAAGTA TTAGCTACTC TCAACCACCA GTCCAGGGTA TTTGCAGTAG CCTTTAGCCC CGACGGCAAA ACCATTGCTA CTGCAAGTTC TGACAAAACC GCCCGCCTCT GGGATACTGA GAATGGCAAA GAATTAGCTA CTCTCAACCA CCAGTCCTTG GTAAATGCAG TAGCCTTTAG CCCGGACGGC AAAACCATTG CTACTGCAAA TTATGACAAT ACCGCCCGCC TCCATTGGGC AACGTCAGAA GGCTTAATTC AAGAAGCTTG TAGTCGTCTC AGTCGGAATT TAACCGCAAA GGAATGGCAG CAGTATATCA ACAGCGACTT GGAGACATAT CAGAAAACTT GCGAAAACCT TCCCGTTCAT CCGAGTGTAA CTGCAGAAGC TGCGCTAACC TCCTCAGACC AAACCCTTTG GTTTGACCTT TGA
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Protein sequence | MERKYLREAL VVGVNRYPML KNKKVGDSNL KAAAKDAEAI ANMLEKYGKF RVQRLPKKYD EEGKETCDHE GIVKVDDLKK AIINLFTPPG KNETPDVALL FFAGHGYVNI EEDIREGFLA TSDAKFAKKL SNNEDIFGVP LSWLKDLLQK SQVQKQIVWL DCCFSGELLN FDGVANLNTQ EKKVSRCFIT ASRSFQTATE KIDGEHGLFT DNLLECLNPE NYVDGWVDNH VLTESIQEKM SQTSQAPMCD NSGDTIILTT NSLNEPLDER WKNDPPYRGL SYFRQQENDG VFFHGRTSLT DKLIELVKDN NFVAVLGASG SGKSSLLRAG LLYQLKRGQK ISGSDRWFYI APFTPEESPL KSLLKSLGKS LGEIKIKGEK VEGLIQFVDQ TEAEQTEGKK VDFLTKELIE EKLIEFIDVV EAERVIMVMD QFEESFTLCK THEERLDFFD CFLAVLERRG EKFCVVLGIR ADFLGRCSEY GGLANKIQGH QLLVTPLDEG EIEEVIKKPA KLVGMDVEPN LVAKMREDFL RNPGSLPLLE YTLDALWSFA TQGENKSPYL TLENYTSLGE IEGALTKRAD AVFESLNDEE KSVAKRIFLE LVQPGEGKIS PGKITDTRRR VILEKLPNER HSLELLSAVS DRLADKNNRL MTKDRSEAGI LLDIVHEDLI RSWKTLRKWV EEYQEALPVE RKIEADAADW EKEGKSENLL LRAGRLTKAE EYLENYGEMA LLDGLAYEFI EASRELKIRE EEKEKERQRK EKERQRKVEE QAARILGMLS DSMIRQKLSL LDKGVLLSVE SMKQYFDIKK RYGKADSGLL VELDQTLRNG VSQLPKHLYT LKHQSDVYAV AFSPDGKTIA TASLDKTARL WDTENGNVLA TLNHQSSVNA VAFSPDGKTI ATASYDKTAR LWDTENGKEL ATLNHQDWVN AVAFSPDGKT IATASYDKTA RLWDTENGKE LATLNHQSSV IAVAFSPDGK TIATASSDKT ARLWDTENGN VLATLNHQDW VIAVAFSPDG KTIATASSDK TARLWDTENG KVLATLNHQS SVNAVAFSPD GKTIATASSD KTARLWDTEN GKVLATLNHQ SSVRAVAFSP DGKTIATASY DKTARLWDTE NGNVLATLLH QDLVIAVAFS PDGKTIATAS WDKTARLWDT ENGKVLATLN HQSSVRAVAF SPDGKTIATA SSDKTARLWD TENGKVLATL NHQSSVNAVA FSPDGKTIAT ASSDKTARLW DTENGKVLAT LNHQSSVRAV AFSPDGKTIA TASSDKTARL WDTENGKVLA TLNHQSRVFA VAFSPDGKTI ATASSDKTAR LWDTENGNVL ATLNHQFWVN AVAFSPDGKT IATASSDKTA RLWDTENGKV LATLNHQSRV FAVAFSPDGK TIATASSDKT ARLWDTENGK ELATLNHQSL VNAVAFSPDG KTIATANYDN TARLHWATSE GLIQEACSRL SRNLTAKEWQ QYINSDLETY QKTCENLPVH PSVTAEAALT SSDQTLWFDL
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