| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_4621 |
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| Symbol | hemC |
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| ID | 4246275 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Trichodesmium erythraeum IMS101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008312 |
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| Strand | - |
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| Start bp | 7100809 |
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| End bp | 7101771 |
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| Gene Length | 963 bp |
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| Protein Length | 320 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 638109491 |
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| Product | porphobilinogen deaminase |
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| Protein accession | YP_724067 |
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| Protein GI | 113478006 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0181] Porphobilinogen deaminase |
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| TIGRFAM ID | [TIGR00212] porphobilinogen deaminase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACAATAT CTGCCTCTAC TCCTACCATT CGGATCGGTT CACGCAAAAG TCAACTCGCC
TTAATTCAAA CCTACTGGGT CCAAGAAAAA CTTGAAAAAA ATTTCCCAAA TATTACATTT
GAAGTCCACA AAATGTCTAC CCAAGGAGAT AAAATTCTAG ATGTAGCTTT AGCAAAAATA
GGAGATAAAG GGCTTTTTAC TAAAGAACTA GAATTAGGAA TGCTGCAAAA TGAAACTGAC
CTAGCAGTTC ATTCCTTAAA AGACTTACCC ACAAACTTAC CAGAAGGTCT AATTCTCGGT
TGCGTCACCG AACGGGAAAA CCCTGCAGAT GCTTTAGTCC TCCATGAAAA ATTAAAAGAT
AAACAACTTG AGACTTTACC AGAAGGTGCT GTCATTGGTA CCTCTTCCCT AAGACGTTTA
GCACAACTGC GCTACCACTT CCCTCACTTA GAATTTAAAG ATGTTCGTGG TAACCTGAAT
ACTAGACTAG CAAAATTAGA TGCTGGTGAG TATGATGCTC TAATATTGGC TTTTGCTGGT
TTGCATAGGT TGGGGATGAG CGATCGCATT CATCAAATTA TACCTCCAGA AATTTCTCTT
CATGCCGTTG GACAAGGTGC TTTAGGAATA GAATGTCGTG CCGGAGATAA TAATATTCTC
AATTTATTGA AAAGTCTGGA ACATACTGCC ACTGCTCAGA GATGTTATGC CGAACGTGCT
TTTCTGAGAG AATTAGAAGG AGGCTGTCAA GTTCCCATTG GTGTTAACAC CCAAATAGAA
GGAGAACAAC TAACTTTAAC TGGTTTAGTC GCTAGTTTAG ATGGTAAGAA ATTAGTTAAG
GATATTGTAA CTGGAGCCAC TGCTGATGCA GAACAAATAG GCATCGAATT AGCTCAAAAA
CTAAGAAAAC AAGGCGCCCA AGAAATCTTA GATCAAATTT TAGCAGAAAT TAACCGTAGT
TAA
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| Protein sequence | MTISASTPTI RIGSRKSQLA LIQTYWVQEK LEKNFPNITF EVHKMSTQGD KILDVALAKI
GDKGLFTKEL ELGMLQNETD LAVHSLKDLP TNLPEGLILG CVTERENPAD ALVLHEKLKD
KQLETLPEGA VIGTSSLRRL AQLRYHFPHL EFKDVRGNLN TRLAKLDAGE YDALILAFAG
LHRLGMSDRI HQIIPPEISL HAVGQGALGI ECRAGDNNIL NLLKSLEHTA TAQRCYAERA
FLRELEGGCQ VPIGVNTQIE GEQLTLTGLV ASLDGKKLVK DIVTGATADA EQIGIELAQK
LRKQGAQEIL DQILAEINRS
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