Gene Tery_4620 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_4620 
Symbol 
ID4246274 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp7099417 
End bp7100196 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content38% 
IMG OID638109490 
Producthypothetical protein 
Protein accessionYP_724066 
Protein GI113478005 
COG category[R] General function prediction only 
COG ID[COG2220] Predicted Zn-dependent hydrolases of the beta-lactamase fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0411707 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACTTAA CTTGGTTAGA CAGTAATTCC TGGCTAATTG AAATTAGAAG TAAACAAATA 
CTCATAGATC CTTGGCTCGT TGGCCCCCTA GTTTTCGGAA ATCTATCTTG GTTGTTTAAA
GGAGAAAGAC TCACACCCCG TAATATTCCA GAAAAAGTAG ACCTTATTGT ATTATCTCAA
GGACTAGAAG ACCACGCTCA CCCAGAAACT CTTAAGCAGC TAGACAAAAA CATTCCTGTT
GTTGCCTCTC CGGCCGCAGC AAAAGTAGTG CAAGAGTTAG GTTACTCTCA AGTAATTACA
CTTGAGCATG GCCATACCTA TGCTTTTGAA AATAGCATTG AAATTAGAGC AGTTCCCGGC
TCACTAGTGG GCCCAACTTT AGTAGAAAAT GGTTATATTC TCAAAGACCT GAGCACTGGG
AACACAATAT ATTATGAGCC CCATGGCAGC CATTCTGAAA AAATCAAAGA ATTTGCACCT
GTAGATGTTG TCATTTCCCC AGTTATCAGT TTGAACTTAC CATTAGTCGG GCCAATAATT
AAAGGAAATG AAAGTGCATT ACAAGTAGCT CAATGGTTAG AACCTCAAAT TATGCTACCT
ACAGCAGCAG GGGGCGATAT AGACTTTCAA GGACTATTAA TATTTTTCCT CAAAGAAAAA
GGAAATATTA AAGAAATACA GTCTCAGTTG GTTAAAAGTA ATTTAGCAAC AAAAATTATC
GAACCCAAAC CAGGAGAACG TTTTGAATTG GAGTTAGAAG AACGAGTATT AACTCATTAG
 
Protein sequence
MHLTWLDSNS WLIEIRSKQI LIDPWLVGPL VFGNLSWLFK GERLTPRNIP EKVDLIVLSQ 
GLEDHAHPET LKQLDKNIPV VASPAAAKVV QELGYSQVIT LEHGHTYAFE NSIEIRAVPG
SLVGPTLVEN GYILKDLSTG NTIYYEPHGS HSEKIKEFAP VDVVISPVIS LNLPLVGPII
KGNESALQVA QWLEPQIMLP TAAGGDIDFQ GLLIFFLKEK GNIKEIQSQL VKSNLATKII
EPKPGERFEL ELEERVLTH