| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_4543 |
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| Symbol | |
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| ID | 4246197 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Trichodesmium erythraeum IMS101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008312 |
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| Strand | + |
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| Start bp | 7007538 |
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| End bp | 7008296 |
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| Gene Length | 759 bp |
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| Protein Length | 252 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 638109420 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_723996 |
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| Protein GI | 113477935 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.18277 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.47016 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATAAATT TAAGTGAAAA AGTTATTTTA ATTACAGGTG CATCTAGTGG TATTAGTGCC
GCAACAGTGC AAACTTTAGC TAGTGCTGGA GCTAAAGTTA TTTTACATTA CTATCATAAA
CAACTTGTAG CAGAAACTAT AGGTGATAAA ATTGGTAAAG ATAAATGTTA TTTATTAAAA
GCAAATTTAG CTGAGAAAAA TGCTGCTGTG AAATTATGGC AGGAGGCGAT CGCCTGGAGA
AATCATATTG ATATTTTGGT GAATAATGCT GGTATTTTTG TTGGTGCTAG TGTAGAGGAT
GAAATGGATA TTTGGGCTAA TGCTTGGCAA GAAACTTTGC AAGTAAATTT AATTGCAGTT
GCGGATCTAT GTCGAGAAGC AATTCGTCAT TTTCAGACTC GTAATGGCGG TACTATTATT
AATATTGCTA GTCGTGCTGC TTTTCGGGGA GATGACCCTC AACATATTCA CTATGCTGCT
AGCAAAGGTG GTGTTATTTC TATGACTCGT ACTATTGCTC GTGGTTTTGC TAAGGATAAT
ATTTTGGCTT ATGCGGTGGC ACCAGGGTTT GTTCGTACTG AGAGAGTAGA AAGTTATCTG
CAAGAAGTAG GCGAAGAGTT TGCTACCCGG GATATTCCCT TGGGTAAGTT GGCAACACCA
GAAGATGTTG CTAATGTAGT AGCTTTTTTG GCATCTGGTT TAGCACCTCA TACGACAGGA
GCAACTATTG ATATTAATGG TGCTTCTTAT GTACGCTAA
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| Protein sequence | MINLSEKVIL ITGASSGISA ATVQTLASAG AKVILHYYHK QLVAETIGDK IGKDKCYLLK
ANLAEKNAAV KLWQEAIAWR NHIDILVNNA GIFVGASVED EMDIWANAWQ ETLQVNLIAV
ADLCREAIRH FQTRNGGTII NIASRAAFRG DDPQHIHYAA SKGGVISMTR TIARGFAKDN
ILAYAVAPGF VRTERVESYL QEVGEEFATR DIPLGKLATP EDVANVVAFL ASGLAPHTTG
ATIDINGASY VR
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