Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_4498 |
Symbol | |
ID | 4246152 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | + |
Start bp | 6940571 |
End bp | 6944248 |
Gene Length | 3678 bp |
Protein Length | 1225 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 638109381 |
Product | Na-Ca exchanger/integrin-beta4 |
Protein accession | YP_723957 |
Protein GI | 113477896 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACGAAT TTTCTCCAGA TGACCATTCT TTATTTCCCG AGGAACCAGA TGAGACATCC CTAAATGTCC ACTATCTCCC TGGGGCTGAC TCGAACCCTG AGGTTACAGA CCCGATGATA CAAGGTGCCT GGGGTGAGGT TCGTGACGAA TTAGCTGATT TTATCTTGGC TCCCGAGTTC GATGACTATA TTAAAACGGC TTTTGGTGAA ACTGTGGACC CGGAGCTGGC AAAGGAGCAG ATAAAGGATG TTTTGACTGG GGAAAATTTG CCGGAGGTTA TTATGTTGCC GGCGGCGGAT ATGGAGCCGG CGGTGGGTGC CTATGATCCT TTGACTGGTT CAATTTATTT GGCTGATTCT TTATTGCCTG ATACTGATGG GGTTTTGGTG GATGTGCTGT TGGAGGAGTT GGGGCATTTT TTGGACTCTC AGTTGTCTGA GTCGGACTCC CCTGGAGATG AGGGTGAGTT ATTGGCTGCT TTGGTGAGGG GTGAGGAGTT GACTCAGTTT CAGGTGATGA TGCTTCGGGG TCAGGATGAT CGGGTAGATA TTTGGGTCGG GGGTGTTGAG GTTGAGGTTG AGGCTAGTGA AAAGGTTGAT TTTGAGAAGG CTCGTAATTT TAAGGTGGGA GTTCTACCTG TGTCAGTAGC AGTAGGAGAT TTTGATGGAG ATGGCATTCC TGATCTGGCT GTGGCGAACT TTTCTTCAGA AAACGTATCA GTTTTATTAG GAAAAGGTGA CGGTAGTTTT GGTTCAGCCA CTAATTTTCC GGTGGGAGAC GGAGCTAATA GAATGGTAGC AGGAGACTTT AATGGAGATG GCATTCCTGA TCTGGCTGTG CCGAGCTCTA GGGACGACAA CGTATCAGTG TTATCAGGAA AAGGTGACGG TAGTTTTGGT TCACCGACTA ATTTTCCGGT GGGAGACTGG CCTTTTTTCT TGGCAGCGGA AGATTTCAAT GGAGATGGCA TTCCTGATCT GGCTGTGGCG AACCTTAGTT CAGACAACGT ATCAGTGTTA TTAGGAAAAG GTGACGGTAG TTTTGGTTCA GCTACTAATT TTCCGGTGGG AGACGAACCA ATATCAGTAG CAGTAGAAGA TTTTAATGGA GATGGCATTC CTGATCTGGC TGTGGCGAAC GGTGGCGATA ACAACGTATC AGTGTTATCA GGAAAAGGTG ACGGTAGTTT TGGTTCAGCT ACTAATTTTC CGGTGGGAGA CCGACCATTC TCAGTAGCAG CAGAAGATTT AAATGGAGAT GGCATTCCTG ATCTGGCTGT GGCGAACGGT GGCGATGACA ACGTATCAGT GTTATCAGGA AAAGGTGACG GTAGTTTTGG TTCAGCTACT AATTTTCCGG TGGGAGACCG ACCTGCGTCA GTAGCAGTAG GAGATTTTAA TGGAGATGGC ATTCCTGATC TGGCTGTGGC GAACAATGGT TCAGACAACG TATCAGTGTT ATCAGGAAAA GATGACGGTA GTTTTGGTTC AGCTACTAAT TTTCCGGTGG GAGACGGACC TATATCAGTA GCAGCAGAAG ATTTAAATGG AGACGGCATT CCTGATCTGG CTACGGCGAA CGAATTTTCA GACAACGTAT CCATCCTCAT CAACAAAACC CCCATAACCA TCATCCCCAA CATCACCATC TCCGACACCA AGCTCACCGA AGGCAACACA AATAAAACCG CCAAATTCAC GGTCACCCTA GACAACCCCA CAACCACCAC AGTCAAAGTC AACTACACCA CAGCCAACCA AACCGCCAAA GTCAACCAAG ACTACAAACT CACCAAAGGC ACCCTCACCT TCCGACCAGG AGAAACCAAC AAAAACATCA CAGTTCCCAT CTTGGGAGAT AACCGAGACG AACCCCAGGA AAAATTCCGA GTCGCTCTGA GCCGCCCCCA AAATGCCAAC ATCAAAGATG GGAGAGCTAC AGGCACCATC GTTGATAACG ACCCAGTTCC CCAAATATCC ATCGGCGATG CCAAAATTAC GGAAGGAAAC CGAGGTCAGA AAAACATGGA ATTTGAAGTC AAATTAAACA ACCCCAGCGG GAAAACAGTG AGAGTAAATT ATGGAACCCA AGAGGGCAGC GCCAAGTCAG GAAAAGATTT TCGAAATCAA AGGGGAGTCC TGACATTCCA ACCAGGGCAG ACGAAAAAAA TAGTGAACAT TCCCATTTTG GGAGATACCC TGGATGAAAA TAACGAACAG TTTCAAGTCA AACTCAGCCG TGCCCAAAAT GGAAATTTTT CAGACAACAC AGCAGTCGGC AGAATTATTG ATAACGACGA AACATTACCC CAGAAAACCC CCCAAATATC CATCGGGGAT GGGGAAATAG TAGAAGGAGA CCGGGGTCAG AAAAAAATGA CATTTCAAGT CAAACTGAGC AACCCCAGCA ACAAAACAGT CACAGTAAAT TATACCACAG TAGATGGGAG CGCTAAGTCA GGAAAAGATT TTCAACAGAA AAGCGGCGTA GTGACATTCA GACCAGGGGA GACGAAAAAG ACAGTTAACG TTTCAGTATT GGGAGACGCT TTATCGGAAA ATCTTGAGTT GTTTCAGGTC AAACTCACCA GTGCCCAAAA TGGGAAATTT TCAGCTCAGA CAGATCAATA TGCCACAGGT ATTATTCAGG ATAATGACCA ACCGCAAATA TCCATCAGTG ATGCCAAAAT TACAGAAGGC AACAGGGATA AGAAAAACAT GAAATTTGAA GTCAAATTGA ATAGCGCCAG CAACCAAACA GTGAAAGTAA ATTATGAGAC TATTGACGGC AGCGCCAAGT CAGGAAAAGA CTATGAAAAG AAAAGCGGAG TCGTGATATT CAAACCAGGG CAGACGAGAA AAACCATCAA CATTTCCACT TTGGGAGACA CATTATCAGA AAATCTTGAG TTGTTTCAGG TCAAACTCAG CGGTGCCCAA AATGGAGAAT TTTCAGCTCA GACAGATCAA TATGCCACGG CTATTATTCA GGATAATGAC AAGCTCCCGG AAATATCCAT CAGTGATGCT AAAATTACGG AAGGAAATAC AGAAAAGAAA GAGATGGAGT TTGAAGTCAA GTTAGATAAG AGTAGCACTC AAACAGTGAA AGTTAATTAT GAGACCGTTG AGGGCAGCGC TAAGTCAGGA AAAGACTTTC AAAAGAAAAG GGGAGTGGTG ATATTCAAAC CAGGGGAGAC GAAAAAGACG GTGAATGTTC CTATTTTGGG AGATACCGAT AATGAAGCGA ATGAGAAATT TGAGGTCATA CTCAGCAGCC CTAAAAATGC TAACTTATCG GATGGGAAAG GAGTCGGGAC TATTCAGGAT AACGACAGAG AAGCTATTGA CTTAGGAGTT CTTTCCGAAA AGCCAATTTT GAAGTCTGAT AAAATTGGGT TTACCACTGG AGGAGCCAAC CGAGATACAG AAGACTATTT TCGTTTTGAG GTGGAAAAAG AAGGTTTAGT AAATATTTTT ATGGATAGTT TTGTGCAAAA TATAGGAATG GAATTATATG ATCAAGATGA TAGTTTACTT TTCCGGTCAA ATGTAGATGG TCTTGGTTTA GAAGCTATTA ATAAGACTTT GGACCCTGGT ATTTATTATT TGAGAGTTTT TCCAGTGGGC TCGAATAGGA CTACATATAA TTTAAGTATT AATATTGTTG AGAGATGA
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Protein sequence | MDEFSPDDHS LFPEEPDETS LNVHYLPGAD SNPEVTDPMI QGAWGEVRDE LADFILAPEF DDYIKTAFGE TVDPELAKEQ IKDVLTGENL PEVIMLPAAD MEPAVGAYDP LTGSIYLADS LLPDTDGVLV DVLLEELGHF LDSQLSESDS PGDEGELLAA LVRGEELTQF QVMMLRGQDD RVDIWVGGVE VEVEASEKVD FEKARNFKVG VLPVSVAVGD FDGDGIPDLA VANFSSENVS VLLGKGDGSF GSATNFPVGD GANRMVAGDF NGDGIPDLAV PSSRDDNVSV LSGKGDGSFG SPTNFPVGDW PFFLAAEDFN GDGIPDLAVA NLSSDNVSVL LGKGDGSFGS ATNFPVGDEP ISVAVEDFNG DGIPDLAVAN GGDNNVSVLS GKGDGSFGSA TNFPVGDRPF SVAAEDLNGD GIPDLAVANG GDDNVSVLSG KGDGSFGSAT NFPVGDRPAS VAVGDFNGDG IPDLAVANNG SDNVSVLSGK DDGSFGSATN FPVGDGPISV AAEDLNGDGI PDLATANEFS DNVSILINKT PITIIPNITI SDTKLTEGNT NKTAKFTVTL DNPTTTTVKV NYTTANQTAK VNQDYKLTKG TLTFRPGETN KNITVPILGD NRDEPQEKFR VALSRPQNAN IKDGRATGTI VDNDPVPQIS IGDAKITEGN RGQKNMEFEV KLNNPSGKTV RVNYGTQEGS AKSGKDFRNQ RGVLTFQPGQ TKKIVNIPIL GDTLDENNEQ FQVKLSRAQN GNFSDNTAVG RIIDNDETLP QKTPQISIGD GEIVEGDRGQ KKMTFQVKLS NPSNKTVTVN YTTVDGSAKS GKDFQQKSGV VTFRPGETKK TVNVSVLGDA LSENLELFQV KLTSAQNGKF SAQTDQYATG IIQDNDQPQI SISDAKITEG NRDKKNMKFE VKLNSASNQT VKVNYETIDG SAKSGKDYEK KSGVVIFKPG QTRKTINIST LGDTLSENLE LFQVKLSGAQ NGEFSAQTDQ YATAIIQDND KLPEISISDA KITEGNTEKK EMEFEVKLDK SSTQTVKVNY ETVEGSAKSG KDFQKKRGVV IFKPGETKKT VNVPILGDTD NEANEKFEVI LSSPKNANLS DGKGVGTIQD NDREAIDLGV LSEKPILKSD KIGFTTGGAN RDTEDYFRFE VEKEGLVNIF MDSFVQNIGM ELYDQDDSLL FRSNVDGLGL EAINKTLDPG IYYLRVFPVG SNRTTYNLSI NIVER
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