| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_4481 |
|---|
| Symbol | glyS |
|---|
| ID | 4246134 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Trichodesmium erythraeum IMS101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008312 |
|---|
| Strand | + |
|---|
| Start bp | 6918044 |
|---|
| End bp | 6920203 |
|---|
| Gene Length | 2160 bp |
|---|
| Protein Length | 719 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 638109364 |
|---|
| Product | glycyl-tRNA synthetase subunit beta |
|---|
| Protein accession | YP_723941 |
|---|
| Protein GI | 113477880 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0751] Glycyl-tRNA synthetase, beta subunit |
|---|
| TIGRFAM ID | [TIGR00211] glycyl-tRNA synthetase, tetrameric type, beta subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.731924 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.0858499 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATAGTAA CGTTTTTATT AGAAATTGGT ACAGAAGAAT TACCGGCAAA TTTTGTCTAT
GAAGCCATAC AACAGTGGCA AGAACTTATC CCGATGACCC TCAAAGAAGC ATTCCTGACA
AATGATTCAG TTAATGTGTA CGCTACACCT AGGCGTTTAG CAGTGGTAAT TGACGCTTTG
CCAACTAAAC AACCAGACCG AGAAGAAGAA ATTAAAGGAC CTCCGGCTAA GGCGGCTTTT
AAAGATGGTA AACCTACTAA AGCGGCAGAA GGATTTAGTA AAAAACAAGG AGTACAACTT
AATGATCTAC AAATATGTAC TACAGAAAAA GGTGATTTTG TTTTCGTAAA TAAAAAAATT
CAGGGTAAAC CAACAGCAGC AATTCTGACA GAATTAATAC CAAAATGGAT CGATAAACTA
GAAGGTAAAA GATTTATGCG TTGGGCAGAT GGAGAACTTA AATTTCCCCG CCCTATTAGA
TGGTTAGTAG CATTGTTAGA TGATGAAATC TTGCCGATAA ATTTAGATAA TGGTTCGCAG
AAAATTACAA GCGATCGCTT CTCTTATGGT CATAGAGTTT TGCATCCTAA ATTAATAGAA
ATTTCTCAAG CAAAAAATTA TGTGGAAGTA TTGAAAAAAG CCTACATTGA AGTAGACTAT
AAACAAAGAA AAAGCAAAAT TGAACAACAA ATAAAAACTG CAGCTGAAGA AATTAAAGGA
AAAGCAGAAA TTTCGGAAGA ATTATTAGCA GAAGTCACAA ATTTAGTAGA ATGGCCAACA
GTAGTAATTG GAAAGTTTGA TGAAGAATTT TTAATTTTAC CTGGGGAAGT AACAACAACA
GTAATGGAGA CACATCAACG TTACTTTCCT GTTTTCAAAT CTACAAAAAC TTTTAAAGAC
ATGGAGTTGT TGCCATATTT TATTACCATT TCTAATGGCG ACCCAGAAAA ATCAGAAATT
ATTGCTATAG GGAACGAAAG AGTAATTAAA GCGAGATTAG CAGACGGACA ATTTTTCTAT
AAAACAGATT TAGCTAAACC ATTAGAAAGC TATTTGCCTG AATTAGAAAC AGTTACATTC
CAAGCCAAAT TAGGCTCAAT GAGAGAAAAA GTTAAACGTA TTGTTAGTAT AGCTAAGTTA
ATTGCTGGAC AGTTACAAAT AACTCAAGAA GAATCCAAAA ATATAGAAAG AGCAGCTCTT
CTTTGCAAAG CTGACTTAGT AACTCAAATG GTTTATGAAT TTCCTGAATT ACAAGGAGTA
ATGGGAGAAA AATATGCTCG CGCTGCTGGA GAAACTGAAG CAGTGGCAAC TGCAATTTTT
GAACATTATT TACCTAGAGG TGCCGGGGAT ATTTTACCCA AAACTATTAG TGGTCAAGTT
ATAAGTTTGG CAGATAGACT TGATACTTTG GTAAGTATTT TTGGATTAGG AATGTTACCT
ACAGGTTCCG CGGATCCTTT TGCTTTACGT CGGGCTGCAA ATGGGGTGGT TAATATTAGT
TGGTCAGCTA ATTTGCCATT AAATTTACAT CAGTTATTAG AAGAAATTGC TACAAATTTT
TTCAAAACTT ATTCCCAAAC AAACTCAGAT TTATTAGCAC AGTTATCTAA CTTTTTATTG
CAGCGAATTA AAACTATTTT ACTGGAGGAA AAAAATATTG ATTATGATTT AGTAAATGCG
GTTTTAGGCG ATAACGATGC TGAATATAAA GAAAGAGGAT TAAAAGATTT ATTAGATGTG
CGTAATCGGG CAATTTTCTT ACAAAATATT CGGCAAAATG GTATGCTTGG TAAAATATAT
GAAACTATTA ACCGTTCAAC TCGCTTAGCT GCTCAAGGTG AGTTGGATAA AATACAACTT
AAGCCTTTAA AAGTTATAGA TTCAAAACTG TTTAAAAGTG AATCAGAATT AGCTTTTTAT
AATGCTTTGG TTGAGTTAGT TCCTCAAACA GAAATATCTC AAAAAACCAG AAATTATCAA
CAATTAGTCG ATGCCTTATT GAAAATAGCT CCTACAGTTA GTAATTTCTT TGATGGGCCT
GACAGTGTAT TGGTAATAGA CCCTGACCCG AAAATTAAAA AAAATCGCTT GAATTTATTA
GGTTTACTCC GCAACAATGC TAGAGTGTTG GCAGACTTTG GCCAAATAGT GAAAAATTAA
|
|---|
| Protein sequence | MIVTFLLEIG TEELPANFVY EAIQQWQELI PMTLKEAFLT NDSVNVYATP RRLAVVIDAL
PTKQPDREEE IKGPPAKAAF KDGKPTKAAE GFSKKQGVQL NDLQICTTEK GDFVFVNKKI
QGKPTAAILT ELIPKWIDKL EGKRFMRWAD GELKFPRPIR WLVALLDDEI LPINLDNGSQ
KITSDRFSYG HRVLHPKLIE ISQAKNYVEV LKKAYIEVDY KQRKSKIEQQ IKTAAEEIKG
KAEISEELLA EVTNLVEWPT VVIGKFDEEF LILPGEVTTT VMETHQRYFP VFKSTKTFKD
MELLPYFITI SNGDPEKSEI IAIGNERVIK ARLADGQFFY KTDLAKPLES YLPELETVTF
QAKLGSMREK VKRIVSIAKL IAGQLQITQE ESKNIERAAL LCKADLVTQM VYEFPELQGV
MGEKYARAAG ETEAVATAIF EHYLPRGAGD ILPKTISGQV ISLADRLDTL VSIFGLGMLP
TGSADPFALR RAANGVVNIS WSANLPLNLH QLLEEIATNF FKTYSQTNSD LLAQLSNFLL
QRIKTILLEE KNIDYDLVNA VLGDNDAEYK ERGLKDLLDV RNRAIFLQNI RQNGMLGKIY
ETINRSTRLA AQGELDKIQL KPLKVIDSKL FKSESELAFY NALVELVPQT EISQKTRNYQ
QLVDALLKIA PTVSNFFDGP DSVLVIDPDP KIKKNRLNLL GLLRNNARVL ADFGQIVKN
|
|---|
| |