| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_4479 |
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| Symbol | |
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| ID | 4246132 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Trichodesmium erythraeum IMS101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008312 |
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| Strand | + |
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| Start bp | 6913662 |
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| End bp | 6914867 |
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| Gene Length | 1206 bp |
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| Protein Length | 401 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 638109362 |
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| Product | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase |
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| Protein accession | YP_723939 |
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| Protein GI | 113477878 |
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| COG category | [I] Lipid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0761] Penicillin tolerance protein |
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| TIGRFAM ID | [TIGR00216] (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming) |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.309423 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGATACAA AAGCCTTTAC CAGAGCACTA AAAAAATCTG AAAATTATAA CCGTCAAGGA
TTTGGTCATG CTCAAGAAGT AGCCACTCTA ATGCAGTCTG CTTACAAAAG TAACCTAATC
CAACAAATTC GAGAAAATAA TTATACCCTA CAAAGAGGGG AAGTTACCAT TAAACTCGCA
AAAACTTTTG GCTTTTGTTG GGGTGTAGAA AGGTCTGTAG CAATGGCTTA TGAAACCCGT
CAACATTTCC CTAACCAACA AATTTGGATT AGTTACGAAT TAATTCATAA TCCTTCTGTG
AATCAGGATA TGAAGGACAT GGAAATTAAG TTTATTCCTG TAATTGATGG TCAAAAAGAT
TTCTCTGTAG CCGGGAATAA CGATGTAGTA ATTTTACCTG CTTTTGGTGC AAGTGTTCAG
GAAATGCAAA TCCTAAAGGA TAAAAATTGC CAAATAGTTG ATACTACTTG CCCTTGGGTT
TCTAAAGTGT GGAATAGTAT AGAAAAACAT AAAAAGAAAA AATTTACCTC TATTATTCAT
GGTAAATATA GTCACGCAGA AACTATTGCT ACTAGCTCTT TTGCTGATAA ATATTTGATA
GTTCTAAATA TGACACAGGC CCAATATGTC TGTAATTATA TTCTCAATGG TGGCAACCGT
GATGAATTTT TAGCTAAGTT TAAGCAGGCT TATTCTGAAG GTTTTGACCC TGATTTGGAT
TTAGAACAAG TTGGTATTGC GAATCAAACA ACTATGTTGA AAACTGAAAC AGAAGAAATA
GGAAAGTTGT TTGAACGAAC AATGATGAAA AAGTATAGAC CAGATCAATT AAACGCACAT
TATCAAAACT TTAATACTAT TTGTGATGCT ACTCAAGAGC GACAAGATGC AATAGCAGGC
TTATTTAATG AAAAGTTAGA TTTAATGGTA GTCATAGGAG GTTTTAATTC TTCTAATACG
ACTCATTTAC AAGAAATGGC TATAGAAAAT GGCATTCCTT CCTATCATAT TGATGGTGCT
CAAAGGATTT TATCTAGGAA TAAAATTGAA CATAAACCTT TAGGAAGAGA AGTGAAAATA
TCGGAGGGTT GGTTGCCTGA AGGTCCGGTA GTTGTAGGTC TCACTTCTGG TGCTTCAACG
CCGGATCAAG CTGTTGAAGA TACTATTAAT AAAATTGTGG CAATGAAATT GGTTGTTATG
AATTAA
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| Protein sequence | MDTKAFTRAL KKSENYNRQG FGHAQEVATL MQSAYKSNLI QQIRENNYTL QRGEVTIKLA
KTFGFCWGVE RSVAMAYETR QHFPNQQIWI SYELIHNPSV NQDMKDMEIK FIPVIDGQKD
FSVAGNNDVV ILPAFGASVQ EMQILKDKNC QIVDTTCPWV SKVWNSIEKH KKKKFTSIIH
GKYSHAETIA TSSFADKYLI VLNMTQAQYV CNYILNGGNR DEFLAKFKQA YSEGFDPDLD
LEQVGIANQT TMLKTETEEI GKLFERTMMK KYRPDQLNAH YQNFNTICDA TQERQDAIAG
LFNEKLDLMV VIGGFNSSNT THLQEMAIEN GIPSYHIDGA QRILSRNKIE HKPLGREVKI
SEGWLPEGPV VVGLTSGAST PDQAVEDTIN KIVAMKLVVM N
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