Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_4478 |
Symbol | |
ID | 4246131 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | + |
Start bp | 6912651 |
End bp | 6913448 |
Gene Length | 798 bp |
Protein Length | 265 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 638109361 |
Product | lipolytic enzyme, G-D-S-L |
Protein accession | YP_723938 |
Protein GI | 113477877 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2755] Lysophospholipase L1 and related esterases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.301699 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACAGTAG CTATACTAAT TGTAACTGAT TACAACTTGC CAGAAGACCC TCAAGTAAGT GCTATAATCA CATCAACTAC TACTAATAGT ATTAAATCGA ACAAACCCAG CCCATTATTT GGGGAAGCTC GAACAAAACT TCTAGCTATT GGGAGAAACC ATAAATGGAC TTATAAACAA TGGGTGGAAC AGTTGCAGCG AGAAGCGATC GCCGCAGCTA ATAACCGTCC CGAACGTCTA ACTATTTTAG TAGGAGATTC TTTGAGCCTT TGGTTTCCCT CAAAACTTCT TCCCTGGGAT AGAAATTGGT TAAATCAAGG AATTTCTGGA GAAACAACAG CTGGTCTATT GAAAAGATTA TACTTATTTG ATAGTACCAG GCCAGAAACA ATTTTTGTGA TGATTGGGAT TAATGATTTG TTAAATGGGG TGGATAATCA GAAAATTCTG GCCAATCAAA GAAAAATTAT CAGTCAACTA CGAACTGTTC ATCCCGGAAG TCAAATAGTT GTCCAATCTA TTTTGCCCCA TAGTGGGGAG TTAGCTACTT GGGAAGGTCG CGATCGCCTC CTGCAACTAT CCAATAGTCG TATCAGAAAA ATTAATCGTA GTCTGAAAGC TTTAGCTGAT GATGAAGGAG CATTCTATTT AAACCTTTAC CCACTATTTA CAAATGCTCA AGGTCTTCTG CGATCTGAAC TAAGTACCGA TGGCCTGCAC CTGAATGATA AAGGTTATCA AGTCTGGAGT ACAGCCATCA AAATGTATAT CAAAATTAGA CTGGAACAAC CATGGTAA
|
Protein sequence | MTVAILIVTD YNLPEDPQVS AIITSTTTNS IKSNKPSPLF GEARTKLLAI GRNHKWTYKQ WVEQLQREAI AAANNRPERL TILVGDSLSL WFPSKLLPWD RNWLNQGISG ETTAGLLKRL YLFDSTRPET IFVMIGINDL LNGVDNQKIL ANQRKIISQL RTVHPGSQIV VQSILPHSGE LATWEGRDRL LQLSNSRIRK INRSLKALAD DEGAFYLNLY PLFTNAQGLL RSELSTDGLH LNDKGYQVWS TAIKMYIKIR LEQPW
|
| |