| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_4470 |
|---|
| Symbol | |
|---|
| ID | 4246123 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Trichodesmium erythraeum IMS101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008312 |
|---|
| Strand | + |
|---|
| Start bp | 6895590 |
|---|
| End bp | 6896672 |
|---|
| Gene Length | 1083 bp |
|---|
| Protein Length | 360 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 638109353 |
|---|
| Product | extracellular solute-binding protein |
|---|
| Protein accession | YP_723930 |
|---|
| Protein GI | 113477869 |
|---|
| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.643517 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.165286 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTTAACA AACTAAATTT ATTTACTTTT ATTGCTATAA GCTGTGTCAT TAATATCTTT
TTACCAGCGC AAGCCGAAAA ATTACGAGTT GGTGTAGCTG GAGCCGCTCC TTTTGTAATC
AAGGATAATG TTTTTAAAGG TATTAGTGTT GAGATATGGA AAGAATTAGC TTTATCCGAA
GGACTGGAAT ATGAGTTTGT GCCGCAAAAT AGTGTAGCTA ATAGTATTGA CAGTATAAAT
AAAGGTGAAC TGGATATTAT TATTGGGCCA ATAAGTATAA CTTCTGAGCG CTTAGAAAAA
GTTGCTTTTA CTCAACCCTA CTTTTATGCC AAAATTGGTT TATTAGCTAG CCCTGAGAGT
CCTACTGTCT GGAGTATAAT TAGACCTTTT TTTGGCCTGG CCTTTATTTC TTCAGTTTGT
TTGTTAACAG TTTTATTATT TATAATGGGT AACCTTCTGT GGTTAGCCGA AAGAAGGCGT
AATAAAGAAC AATTTCCTCC AAATTATTTC CATGGAGTAG GCAATGCTAT GTGGTTTGCT
TTGGTAACTT TAACCACGGT AGGATATGGC GATATGACTC CAGTTACTAA ATCTGGGCGT
ATTATTACTG GAGTATGGAT GGTTCTTACT ACAGTGACAA TTTCTTCTTT GACTGCTGGT
ATAGCTACGG CTTTAACTGT TTCTTTAACT AATCAAAGAG TTACAGAGTT TAGTTATCCT
CAAGATATTA AGGATGCAAG AGTTTCTGTT ATTAAAGGTT CTACTGGAGA GAAGTGGGCT
AAGCAATATG AGGCGCGTAT TAATCAGACT GAGACTTTAG TAGATGCAAT TAATTTACTC
AAGTTAAATG AAGTGGATGG TGTGATTTTT GATGTTCCTG CTCTTCAATA TTATTTACGT
AATGATCGTG AACAGCGCTT AAAGTTGTCC CCAGTTAATT TTGCTGATGA ACCTTATGGT
TTTATTGTAT CTCTTGATAA CTCTTTTATC AAAAATCTTG ATATTAAACT TTTAGAAATG
CGAGAAAATG GCAAGATTAG AGAGATAGAA TCTAAGTGGT TGTCTAGTTC TAAAGATAAT
TAG
|
|---|
| Protein sequence | MLNKLNLFTF IAISCVINIF LPAQAEKLRV GVAGAAPFVI KDNVFKGISV EIWKELALSE
GLEYEFVPQN SVANSIDSIN KGELDIIIGP ISITSERLEK VAFTQPYFYA KIGLLASPES
PTVWSIIRPF FGLAFISSVC LLTVLLFIMG NLLWLAERRR NKEQFPPNYF HGVGNAMWFA
LVTLTTVGYG DMTPVTKSGR IITGVWMVLT TVTISSLTAG IATALTVSLT NQRVTEFSYP
QDIKDARVSV IKGSTGEKWA KQYEARINQT ETLVDAINLL KLNEVDGVIF DVPALQYYLR
NDREQRLKLS PVNFADEPYG FIVSLDNSFI KNLDIKLLEM RENGKIREIE SKWLSSSKDN
|
|---|
| |