| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_4460 |
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| Symbol | |
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| ID | 4246113 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Trichodesmium erythraeum IMS101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008312 |
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| Strand | + |
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| Start bp | 6874976 |
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| End bp | 6878719 |
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| Gene Length | 3744 bp |
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| Protein Length | 1247 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638109343 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_723920 |
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| Protein GI | 113477859 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4995] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0317978 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGACAACA AACGCATAGA AGCATACACC AACCTCGTTA ACCAACTGCT AACTTCCCCC
AGCGGTGAGA AAGCAAAAAT CCTCGAAACA AACCTAGACT TGGTAGATGA AGGGTTACTG
GAAATAATGG AACTTTACGC ACAACAACTG GCAGAAAACG ATGACGAAAA TGCTCAAAAC
GCTGCTAATT TTTTACGTCA TCTCAGGAGT CAGCTTGTAG AGTTACTAGA AACTTCAGAA
TTTTCTCCCT CAACTCATTA CTCATCGGCA GAATATTTGA ATTTCTGGAG GGAGGTGTTG
CTGGCAACTG CAGAAAGCAA AGGTGACCCG AAAGTTGTCT ACCCACTCCT ACAAGAAAAC
TTAGATAAAC TTGATGATAA CTTTGCTGAT ATATTGCGAA ACTGGGCAAC TGCTAAATTT
TCTGAAGTGG AGGCGGGTGT AGCAAAAAGC ATTGCTATAG ATATTATTTA TTTCAGTGTC
TACATTAAGC AATTTCCTCT GGGCAGCAAA GCAAACAACA TGGAAATTAG CATTGCAGGT
TATGAAGTAG TGCTAAAAGT TTTTACATAT AAGAGTCACC GGGAAATTTG GGCAATGACT
CAAAATAATC TCGGCGCTGC CTACAGTGAC AGAATAAGGG GAGACAAAGC CGAAAATATT
GAAGCTGCCA TTGCTGCATA CCAACAAGCT TTGCTGGTGT ACACCCAAAC TGACTTCCCC
ATGGACTGGG CAATGACTCA AAATAATCTC GGCAATGCCT ACAGTGACAG AATAAGGGGA
AACAAAGCCG AAAATATTGA AGCTGCCATT GCTGCATACG AACAAGCTTT GCTGGTGTAC
ACCCAAACTG ACTTCCCCAT GGACTGGGCA AGAACTCAAA ATAATCTCGG CATTGCCTAC
AGTAACAGAA TAAGGGGAGA CAAAGCCGAA AATATTGAAG CTGCCATTGC TGCATTCCAA
CAAGCTTTGC TGGTGTACAC CCAAACTGAC TTCCCCATGG AATGGGCAAG AACTCAAAAT
AATCTCGGCA TTGCCTACAG TAACAGAATA AGGGGAGACA AAGCCGAAAA TATTGAAGCT
GCCATTGCTG CATGCCAACA AGCTTTGCTG GTGCGCACCC AAACTGACTT CCCCATCAAC
TGGGCAGCAA CTCAAAATAA TCTCGGCGCT GCCTACAGAG ACAGAATAAG GGGAGACAAA
GCCGAAAATA TTGAAGCCGC CATTGCTGCA TGCCAACAAG CTTTGCTGGT GTACACCCAA
ACAGACTTCC CCATCAACTG GGCAAGAACT CAAAATAATC TCGGCATTGC CTACAGTGAC
AGAATAAGGG GAGACAAAGC CGAAAATATT GAAGCTGCCA TTGCTGCATA CCAACAAGCT
TTGCTGGTGC GCACCCAAAC AGACTTCCCC ATCAACTGGG CAACAATTCA AAATAATCTC
GGCGCTGCCT ACAGAGACAG AATAAGGGGA GACAAAGCCG AAAATATTGA AGCTGCCATT
GCTGCATACG AACAAGCTTT GCTGGTGCGC ACCCAAACTG ACTTCCCCAT GGACTGGGCA
AGAACTCAAA ATAATCTCGG CAATGCCTAC AGTGACAGAA TAAGGGGAGA CAAAGCCGAA
AATATTGAAG CCGCCATTGC TGCATACCAA CAAGCTTTGC TGGTGCGCAC CCAAACTGAC
TTCCCCATGG ACTGGGCAAT GACTCAAAAT AATCTCGGCA ATGCCTACAG TGACAGAATA
AGGGGAGACA AAGCGGAAAA TATTGAAGCT GCCATTGCTG CATACCAACA AGCTTTGCTG
GTGCGCACCC AAACTGACTT CCCCATGGAC TGGGCAGGAA CTCAAAATAA TCTCGGCAAT
GCCTACAGTG ACAGAATAAG GGGAGACAAA GCCGAAAATA TTGAAGCCGC CATTGCTGCA
TACGAACAAG CTTTGCTGGT GTACACCCTA GAAGCAGACC CCATCAAACA TCTCGGAACC
ACCCGCAACC TAGGCAACCT ATATTTCGAC AACCAAAACT GGCAACTCGC CGCCGACAAC
TATAAAAAAG CCATAACCGC AGTGGAACTC AGCCGCAGTT GGGCAACCAC CGACGATCGC
CGCCAGGAAA TACTCAAAGA AAACATCAAT ATCTATAACA AAGCCATCCA AGCATACATA
CACCTAAAAA AGTTAGAACA AGCACTAGAA ATAGCCGAGC GCAGTCAAGC CCGAAACCTA
GTCCAACTCC TCACCAACCG CGACTTAGTT CCTCAAGATA ATGTACCCCC AGAAATAACC
CAACAACTTC AACAACAACA AAAAGAAATT CGCGTCAACA AAGGAGAACT AGAGAAAGTC
AGAAAACAAC TATCACAGCA AAACACAGAG GAAAAAACAT CATTAGAAAA ATCTGAGAAA
CAGCTAAACG AAGAATTACA GAAACTCAGA CAGCAGTTAG AAAAAACATT CAATCAAATT
CAGGAATACG ACCCCACCTT CCGCCTGACC CAGGAAGTGC AACCAATAGC TTTTAGAGAA
ATTCAGCAAC TTGCCACAGA ACAGCAGACA GCAATTATTG AGTGGTATAT TATGGGAGAA
AAATTCCTAG CATTTATCCT AGTTCCCCCA ACCTCAACAG CAACATCAGA ATTATTTATG
TGGCAGTCTA CCGAAGACGA CAGTAAAAAT TTAGAGGAGT GGGTAAAAGA ATATCTAGAA
AAATATTATG AACTTCAGGA AGCAGAGCTA GAAAATCAGG AAAAAGCCAA AAAATTACAA
CAAGAATGGG AGACAAAAAT AACAACTCGC CTAGAAAAAC TAGGAGAAAT TTTACATATA
AAAGAAATAC TCCAACCCAT CCTCGAAAGT GAATGTCAAA GACTCACCTT AATTCCCCAT
TCCTTCCTAC ATTTTCTCCC CCTTCATATC TTACCCATTA ATAACCCAGA AAATAGTCAA
GAAAACCCAG AAAAAAAATA TCTCCAGGAT TATTTTAACC AGGGAGTAAG CTATGCTCCA
AGCTGCCAAA TATTGCAAAA AGTTAGAGAA CGAAAAAACC AAGAATTTCA GAGTTTATTT
GCCATTCAAA ACCTCAACGA CACCGAAAAT TCACCCCACT TAGGCATTAT TTCAATAATC
AAAAAACAAT TTAATAATGT GGAAATAATC CAAGAAAATC AAGCCACAAA ATCAGCATTA
ATTAACCATC CCAAATTATC CCTTGCTAAC TCCATATTAT TCTTCTGTCA TGGAGTATTT
AACCCTACTT ATCCCCTAGA TTCAGGATTA ATATTAGCCG ATGAAAAACT CACATTAGGA
GATATTATTC AAAACCTAAA TTTAAGCAAA TGTCGCCTAG TAACCCTAGC CGCTTGCGAA
ACAGGATTAA CAGATATCTT CAATCAAGAA TATGTAGGTT TACCCAGCGG TTTTCTCCTA
GCAGGAAGTA CAAATATTAT TGCCAGTCTT TGGAGTGTGA GAGTTGATGC AACAGCGTTA
TTAATGTTAA GATTATATCA AGAATTAAAA AAATATGATA ATATAATAAT AGCCTTAAAA
ACAGCCCAAA ACTGGTTAAG AGATATAAAG GTGCAAGAAT TAAAAGAGTG GGTCAGAAAG
TCCCCTCTAA AAATAAAAAT TCATTGGCAA GAAGAATTAG AAAAAACATT TACTAAAATG
GAAAATCTAG AAGGAGCCAA TTGTAAACCA TATAACTCAC CTTATTTTTG GGCTGGTTTT
TGTGTTGTCG GAAAAGGAGA ATAA
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| Protein sequence | MDNKRIEAYT NLVNQLLTSP SGEKAKILET NLDLVDEGLL EIMELYAQQL AENDDENAQN
AANFLRHLRS QLVELLETSE FSPSTHYSSA EYLNFWREVL LATAESKGDP KVVYPLLQEN
LDKLDDNFAD ILRNWATAKF SEVEAGVAKS IAIDIIYFSV YIKQFPLGSK ANNMEISIAG
YEVVLKVFTY KSHREIWAMT QNNLGAAYSD RIRGDKAENI EAAIAAYQQA LLVYTQTDFP
MDWAMTQNNL GNAYSDRIRG NKAENIEAAI AAYEQALLVY TQTDFPMDWA RTQNNLGIAY
SNRIRGDKAE NIEAAIAAFQ QALLVYTQTD FPMEWARTQN NLGIAYSNRI RGDKAENIEA
AIAACQQALL VRTQTDFPIN WAATQNNLGA AYRDRIRGDK AENIEAAIAA CQQALLVYTQ
TDFPINWART QNNLGIAYSD RIRGDKAENI EAAIAAYQQA LLVRTQTDFP INWATIQNNL
GAAYRDRIRG DKAENIEAAI AAYEQALLVR TQTDFPMDWA RTQNNLGNAY SDRIRGDKAE
NIEAAIAAYQ QALLVRTQTD FPMDWAMTQN NLGNAYSDRI RGDKAENIEA AIAAYQQALL
VRTQTDFPMD WAGTQNNLGN AYSDRIRGDK AENIEAAIAA YEQALLVYTL EADPIKHLGT
TRNLGNLYFD NQNWQLAADN YKKAITAVEL SRSWATTDDR RQEILKENIN IYNKAIQAYI
HLKKLEQALE IAERSQARNL VQLLTNRDLV PQDNVPPEIT QQLQQQQKEI RVNKGELEKV
RKQLSQQNTE EKTSLEKSEK QLNEELQKLR QQLEKTFNQI QEYDPTFRLT QEVQPIAFRE
IQQLATEQQT AIIEWYIMGE KFLAFILVPP TSTATSELFM WQSTEDDSKN LEEWVKEYLE
KYYELQEAEL ENQEKAKKLQ QEWETKITTR LEKLGEILHI KEILQPILES ECQRLTLIPH
SFLHFLPLHI LPINNPENSQ ENPEKKYLQD YFNQGVSYAP SCQILQKVRE RKNQEFQSLF
AIQNLNDTEN SPHLGIISII KKQFNNVEII QENQATKSAL INHPKLSLAN SILFFCHGVF
NPTYPLDSGL ILADEKLTLG DIIQNLNLSK CRLVTLAACE TGLTDIFNQE YVGLPSGFLL
AGSTNIIASL WSVRVDATAL LMLRLYQELK KYDNIIIALK TAQNWLRDIK VQELKEWVRK
SPLKIKIHWQ EELEKTFTKM ENLEGANCKP YNSPYFWAGF CVVGKGE
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