| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_4437 |
|---|
| Symbol | |
|---|
| ID | 4246090 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Trichodesmium erythraeum IMS101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008312 |
|---|
| Strand | - |
|---|
| Start bp | 6839236 |
|---|
| End bp | 6842421 |
|---|
| Gene Length | 3186 bp |
|---|
| Protein Length | 1061 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 638109320 |
|---|
| Product | glycosyl transferase family protein |
|---|
| Protein accession | YP_723897 |
|---|
| Protein GI | 113477836 |
|---|
| COG category | [N] Cell motility
[R] General function prediction only
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG1216] Predicted glycosyltransferases
[COG3063] Tfp pilus assembly protein PilF |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTTCTTA CTTCTTTTGC TAAAGGAAAC AAACTCTTAC GGGAGGGAAA ATTCGAGTCG
GCGATCGCTT ATTATCAAAA AGCCATAGAA GAAAATCCCC AGTTTACCTG GTCTTACCAA
AATTTAGGGG AAGCTCTTGA GAAAACTGGG CGGATAGAAG AAGCGATCGC TTCTTTTCGT
CAGGCTGTGG CCATAGATCC GCAATCCCAC TGTTTTCTAT ACAAATTGGG GATAACATTG
AGTCGGCAAG GCCAGTTTCA GGAAGCTGTG GGTTACTTAC GTCGGGCGAT CGATTTAAAC
AAAAATGTGC CTGAGTTTTA TCTAGGTTTG GGAGCTGCCT TGGTGAAGTT GAGGCAATGG
TCTGAAGCAG TTGAATGTAT TCATCAGGCA TTGAGGGTGT TGGATGAAAA AGTAGGAACG
TTATATGAAA GAGCTCTACA GGCAGAGGGT TATTTTTATT TGGCAGAAGC TAAGTCTGGT
CAAGAGCAAT GGTCTGATGC AATAAAGTTA TATTCTCAGA GTTGGGAAAT TTATCCATAT
CGGGTTAACT GCTGTATCAG TTGGGCAGTA GCTTTAGGTA AGTTAGGAAG ATGGAGTGAA
GCGGTGGCTT TATATCGTCA AGCTGTAGCT TTCTCTGGGG AGTCTGGTGA GGTGTACTTT
GGTTTAGGGA AGGCTTTGGG ACAGTTAAAA CAATGGGAGG AGGCTGTTGT TGAGTATCGA
CGAGGGATAG ATTTTGGTTT TGATGGGGCG GAGGTGCGCC ATTCTCTGGG GTATGCTTTC
CTACAGTTAA AAAAATGGGA GGAGGCTATT GTTGAGTATC GTTTGGTGGT AGAGGTTGAT
CCTAAGTTCG CACCAGTTCG GCACCAGCTT GGGTATGCTT TGATGCAATT GGAGCATTGG
GAGGAGGCTG TGATTGAGCT GCGTCAAGCT GTGGAGTTAT ATCCTAGGTC GGCTATAGTT
TGGCAGCAGT TGGGAGATGT TTTATGGCAG TTGGAGGAAG ATGGGGAGGC TGAAGAAGCT
TATCAAAAGG CGACAGAACT AAATCCTGAC ATGGCTAATT TGCCAAAAGC AAAAAGTGTG
GCAAGTGCAC TTTCCAAGTC AGAGATAGGG ACAATAAATA ATACAGATCG GTTTGTTCGG
TTAGTACACG AAGCTGATAA GCGAGCTTTT ATAGACTACT CATACACAGA ACTATCCGCC
TCCCACAATT TCGACTTAAA TTGTCTTAAT CTACATTGGG TGACTTGTGA CTTTTCTCCC
GGTGCTGGGG GACACATGAC AATATTCCGA TTTATCAAAT TACTAGGTCA ACTCGGTCAT
CACAATACTC TCTGGATATA CCAACCAGTT GTTCATAAGT TTGAAACAGA GGCATTAGAG
ACTATATTAA AGTATTTTCA AACTTTACAG GTAGAAGTCA AGTTTATTAT CGGCAGGGAA
GAGTTTGAGA GTGCAGCAGG AGATGTTATT ATTGCCACAG ATTGGGGTTC GGTCCAGTTT
GCTGTCTCCA ATCCTAATTT CCACAACAGA TTTTACTTTG TTCAAGACTA CGAGCGGTTC
TTTTCTCCCC AAGGAACAAA AGCACTTTTG GCTGATTTGA CTTATAGTTA TAAACTAGAT
TGCATTTGTG CAGGGCCGTG GCTAGAAAAA ATAATGTCTG AAAAATACGG TTCTTGGGCT
TGTAAGTTTT GGCTAGCAGT GGATACTTCG GTTTATTTTC CTCAAACAGA TGAAAAAGTT
AATGATGTTG TCAAAATTGC CTTTTATTAT CGTCGTGGCA CAGAGAGAAG AGCTGTTGAA
TTGGGGTTGC TGGCATTAGA AAAGTTAGCA ACTTATAGAG AAGATTTTGA AGTGCATTTC
TTTGGGGGGA ATACTAATTT TGATCGTGCA CCTTTTCAGT TTAAGTCTCA TGGAATTTTA
ACTGCCCAAC AGCTAAGGGA ACTTTACCAA GATAGTGACA TTGGTATTGT ATTTTCATCA
ACTAATTATT CATTAGTTCC TCAAGAGATG ATGGCTTGTG GTTTACCAGT GATAGAACTG
GCTGGTGAAA GTACGGAAGT TGTATTTCCC CCAGGGGTAG TAAGGTTAGC CGGTCCGGCT
CCTCTGGATA TCACTGATGC TATTGTAGAG TTAATGGACT CAAAAACTCC CCGTGAAGAA
CAAGCACATT TAGCAACAGA ATGGGTAAAA CAGTTTACAT GGGAACAAGA AGTAGCTAAG
ATAAACGGTT TTATTCAAAA TAGGCTTCTT GAAAAAAAGC CAAATTCCAT AGTTGTTAAG
GCAAAACCCT CTAAACCAAA AGCTTCTGTT TTTATACCAA CCTTGAACGG TGGTGAGTTG
CTTAAACAGG TAATAGAAAG GGTGAAGGAG CAAGTCACAC CGTGGTTGTT TGAGATTGTA
GTTATTGATA GTGGCTCAAC AGATGGAACC TTAGAATGGA TGAAGGCAGA CCCAGTAATT
AGACTTTACG AGATACCTAA GTCCGAGTTT CAGCATGGTA AGACTAGGAA CTTGGGGGCA
TCTTTGTCTG AAGGGGAAAA TATTGCTTTT TTGACCCATG ACGCTCTGCC AGTGGATAAA
AATTGGTTAT ATTATCTGGT GACTACACTA GAAAATTTTC CTAATGCGGC AGGGATATTT
GGCAAGCATT TAGCATATCC TGATGCAGAT GCTTTTACTA AGCGAGACCT GGAAAACCAT
TTTCAGATTT TTGATGAACT ACCAGTGTAC CTTGATAAGA ATACAAATTT CAAGCTATAT
AAGAACAAAG ATTTGTCCTG GAAACAAAAA CTTCATTTTT ACAGCGACAA TAATTCCTGT
ATGCGTCGAT GTGTTTGGGA AAAAATTCCA TATCCAGAGA TTAGTTTTGG AGAGGATCAG
GCTTGGGCTT GGCAAGTTAT TGAGGCGGGG TATGGAAAGG TGTATGGGAG AGATGCAGTG
GTGTATCATT CACATAATTT TTTGCCGGAG GAGATTTTCA GTCGCAGTCT GGAGGAGGCT
TCATTTTTCC AAAAAACTTT TGGGTATGAG TTGGTTAATA AAGACAACAT TTACGAACAA
ATAAAGTTGC TAAATGAACA TGATAGCCAG TGGGGAAGGG ATAAAAATTT AGATGAAAAA
GTAATTATAA TGAGACAAAA AAATAATGAG GCAAGAATAC ATGGCTATAT GGCAGCTTTG
AAGTAG
|
|---|
| Protein sequence | MLLTSFAKGN KLLREGKFES AIAYYQKAIE ENPQFTWSYQ NLGEALEKTG RIEEAIASFR
QAVAIDPQSH CFLYKLGITL SRQGQFQEAV GYLRRAIDLN KNVPEFYLGL GAALVKLRQW
SEAVECIHQA LRVLDEKVGT LYERALQAEG YFYLAEAKSG QEQWSDAIKL YSQSWEIYPY
RVNCCISWAV ALGKLGRWSE AVALYRQAVA FSGESGEVYF GLGKALGQLK QWEEAVVEYR
RGIDFGFDGA EVRHSLGYAF LQLKKWEEAI VEYRLVVEVD PKFAPVRHQL GYALMQLEHW
EEAVIELRQA VELYPRSAIV WQQLGDVLWQ LEEDGEAEEA YQKATELNPD MANLPKAKSV
ASALSKSEIG TINNTDRFVR LVHEADKRAF IDYSYTELSA SHNFDLNCLN LHWVTCDFSP
GAGGHMTIFR FIKLLGQLGH HNTLWIYQPV VHKFETEALE TILKYFQTLQ VEVKFIIGRE
EFESAAGDVI IATDWGSVQF AVSNPNFHNR FYFVQDYERF FSPQGTKALL ADLTYSYKLD
CICAGPWLEK IMSEKYGSWA CKFWLAVDTS VYFPQTDEKV NDVVKIAFYY RRGTERRAVE
LGLLALEKLA TYREDFEVHF FGGNTNFDRA PFQFKSHGIL TAQQLRELYQ DSDIGIVFSS
TNYSLVPQEM MACGLPVIEL AGESTEVVFP PGVVRLAGPA PLDITDAIVE LMDSKTPREE
QAHLATEWVK QFTWEQEVAK INGFIQNRLL EKKPNSIVVK AKPSKPKASV FIPTLNGGEL
LKQVIERVKE QVTPWLFEIV VIDSGSTDGT LEWMKADPVI RLYEIPKSEF QHGKTRNLGA
SLSEGENIAF LTHDALPVDK NWLYYLVTTL ENFPNAAGIF GKHLAYPDAD AFTKRDLENH
FQIFDELPVY LDKNTNFKLY KNKDLSWKQK LHFYSDNNSC MRRCVWEKIP YPEISFGEDQ
AWAWQVIEAG YGKVYGRDAV VYHSHNFLPE EIFSRSLEEA SFFQKTFGYE LVNKDNIYEQ
IKLLNEHDSQ WGRDKNLDEK VIIMRQKNNE ARIHGYMAAL K
|
|---|
| |