Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_4423 |
Symbol | panB |
ID | 4246076 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | - |
Start bp | 6818479 |
End bp | 6819270 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 638109307 |
Product | 3-methyl-2-oxobutanoate hydroxymethyltransferase |
Protein accession | YP_723884 |
Protein GI | 113477823 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0413] Ketopantoate hydroxymethyltransferase |
TIGRFAM ID | [TIGR00222] 3-methyl-2-oxobutanoate hydroxymethyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAGTTA CAACTAAACA ATTAATTCAA TGGAAACAAA AAGGTCGCCC AATAGTAGCT CTGACAGCTT ATGATTATAC GATCGCTCAA CTTTTAGACA ATGCTGGAGT AGATTTAATT CTGGTGGGAG ATTCTCTGGG AATGGTAACT TTAGGTTATG AAACAACTTT ACCAGTGACT CTTGAGGAAA TGATTCATCA TGCTAAAGCA GTACGACGAG CTGTAAAACA AGCTTTAATG GTGGTAGATT TACCATTTTT AACTTATCAG GAAAGTCCCC AACAAGCTAT ACATTCAGCA GGAAGAATAC TAAAAGAAAC AGGAGCTCAA GCTGTCAAAC TAGAAAGTGG TAATGAAGCG ATCGCTCAAA CTGTTAAGAA ACTAACGTCA ATAGGTATTC CTGTGATGGG TCATATTGGC CTAATTCCCC AATCTGTACA TCAATTTGGA GGTTATCCTC AACAAGGCAA CGCTCCTGAT GCTAGTGCGC GTATTTTAAC AGAAGCTCTA GCTTTGGCAG AAGCTGGTGC TTTTGCCCTA GTTCTAGAAC ATATTAAAGC AGATTTAGCT AAAGAGATTA CAGAAAAAGT TTCTATTCCT ACTATTGGTA TTGGTGCAGG TGCCTATTGT GATGGTCAGA TATTAGTGAT TAATGATGTT TTAGGGCTTT CCCATTGGCA GCCACCTTTT GCTAAACCTT ATGTTAACTT GCGAGAGACT ATTACTCAAG CAGTTAAAGA ATATAGTTTA GAAGTAAAGA AAAGAAAATT TCCTCAACCA CCATCACCAT AG
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Protein sequence | MAVTTKQLIQ WKQKGRPIVA LTAYDYTIAQ LLDNAGVDLI LVGDSLGMVT LGYETTLPVT LEEMIHHAKA VRRAVKQALM VVDLPFLTYQ ESPQQAIHSA GRILKETGAQ AVKLESGNEA IAQTVKKLTS IGIPVMGHIG LIPQSVHQFG GYPQQGNAPD ASARILTEAL ALAEAGAFAL VLEHIKADLA KEITEKVSIP TIGIGAGAYC DGQILVINDV LGLSHWQPPF AKPYVNLRET ITQAVKEYSL EVKKRKFPQP PSP
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