Gene Tery_4423 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_4423 
SymbolpanB 
ID4246076 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp6818479 
End bp6819270 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content38% 
IMG OID638109307 
Product3-methyl-2-oxobutanoate hydroxymethyltransferase 
Protein accessionYP_723884 
Protein GI113477823 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0413] Ketopantoate hydroxymethyltransferase 
TIGRFAM ID[TIGR00222] 3-methyl-2-oxobutanoate hydroxymethyltransferase 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGTTA CAACTAAACA ATTAATTCAA TGGAAACAAA AAGGTCGCCC AATAGTAGCT 
CTGACAGCTT ATGATTATAC GATCGCTCAA CTTTTAGACA ATGCTGGAGT AGATTTAATT
CTGGTGGGAG ATTCTCTGGG AATGGTAACT TTAGGTTATG AAACAACTTT ACCAGTGACT
CTTGAGGAAA TGATTCATCA TGCTAAAGCA GTACGACGAG CTGTAAAACA AGCTTTAATG
GTGGTAGATT TACCATTTTT AACTTATCAG GAAAGTCCCC AACAAGCTAT ACATTCAGCA
GGAAGAATAC TAAAAGAAAC AGGAGCTCAA GCTGTCAAAC TAGAAAGTGG TAATGAAGCG
ATCGCTCAAA CTGTTAAGAA ACTAACGTCA ATAGGTATTC CTGTGATGGG TCATATTGGC
CTAATTCCCC AATCTGTACA TCAATTTGGA GGTTATCCTC AACAAGGCAA CGCTCCTGAT
GCTAGTGCGC GTATTTTAAC AGAAGCTCTA GCTTTGGCAG AAGCTGGTGC TTTTGCCCTA
GTTCTAGAAC ATATTAAAGC AGATTTAGCT AAAGAGATTA CAGAAAAAGT TTCTATTCCT
ACTATTGGTA TTGGTGCAGG TGCCTATTGT GATGGTCAGA TATTAGTGAT TAATGATGTT
TTAGGGCTTT CCCATTGGCA GCCACCTTTT GCTAAACCTT ATGTTAACTT GCGAGAGACT
ATTACTCAAG CAGTTAAAGA ATATAGTTTA GAAGTAAAGA AAAGAAAATT TCCTCAACCA
CCATCACCAT AG
 
Protein sequence
MAVTTKQLIQ WKQKGRPIVA LTAYDYTIAQ LLDNAGVDLI LVGDSLGMVT LGYETTLPVT 
LEEMIHHAKA VRRAVKQALM VVDLPFLTYQ ESPQQAIHSA GRILKETGAQ AVKLESGNEA
IAQTVKKLTS IGIPVMGHIG LIPQSVHQFG GYPQQGNAPD ASARILTEAL ALAEAGAFAL
VLEHIKADLA KEITEKVSIP TIGIGAGAYC DGQILVINDV LGLSHWQPPF AKPYVNLRET
ITQAVKEYSL EVKKRKFPQP PSP