Gene Tery_4410 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_4410 
SymbolrbcL 
ID4246063 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp6791736 
End bp6793166 
Gene Length1431 bp 
Protein Length476 aa 
Translation table11 
GC content44% 
IMG OID638109294 
Productribulose bisophosphate carboxylase 
Protein accessionYP_723871 
Protein GI113477810 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1850] Ribulose 1,5-bisphosphate carboxylase, large subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTACG CTAAAACACA AACTCAGTCT AAATCTGGGT ATCAGGCTGG AGTAAAAGAC 
TATAAACTGA CTTACTATAC CCCTGATTAC ATACCAAAAG ATACAGACCT TTTAGCAGCT
TTCCGTATGA GTCCTCAACC TGGAGTTCCT CCAGAAGAAG CTGGTGCTGC AGTGGCTGCT
GAATCTTCTA CTGGTACTTG GACAACAGTA TGGACTGACT TATTGACTGA CCTTGATCGC
TACAAAGGTC GTTGTTATGA TATTGAATCT GTTCCTGGTG AAGATAATCA ATATATTTGC
TATGTAGCTT ATCCTCTAGA TTTATTTGAG GAAGGCTCTG TAACTAATAT GTTAACCTCT
ATTGTCGGTA ACGTATTTGG TTTCAAAGCA CTACGGTCAC TACGTCTGGA AGACTTAAGG
ATTCCAGTTG CTTACCTGAA GACTTTCCAA GGCCCTCCTC ACGGTATTAC TGTTGAGCGT
GATAAATTAA ATAAATATGG TCGTCCTTTA TTAGGTTGTA CTATTAAGCC TAAGTTAGGT
TTATCCGCTA AGAACTACGG TAGAGCAGTT TATGAGTGCT TACGTGGAGG CTTAGACTTC
ACCAAGGATG ACGAAAATAT TAACTCTCAA CCTTTCATGC GCTGGCGCGA TCGCTTCCTA
TTCGCTCAAG AAGCTATTGA AAAGGCCCAA GCCGAAACAG GTGAAATTAA AGGTCACTAC
CTCAACGTAA CTGCCCCTAC CTGTGAAGAA ATGTTAGAGC GTGCAGATTT TGCTAAGGAG
ATTGGTACTC CAATCATTAT GCACGACTAT CTAACAGGTG GTTTTACAGC TAATACAACT
CTAGCGAAAT GGTGCCGTCG TAATGGTGTA TTATTACACA TTCACCGGGC AATGCACGCT
GTTATTGACC GTCAGAAAGC CCACGGTATT CACTTCCGGG TTTTAGCTAA GTGCTTGAGA
ATGTCTGGTG GTGACCACCT CCACTCAGGT ACTGTGGTTG GAAAGCTCGA AGGTGAAAAA
GGCATTACAA TGGGCTTTGT AGACTTAATG CGGGAAGACC ACGTTGAGCA AGACCGGGAA
CGTGGTATTT ACTTTACTCA AGATTGGGCT TCTATGCCTG GTGTAATGCC AGTAGCTTCT
GGTGGTATTC ACGTTTGGCA TATGCCAGCT CTAGTAGAAA TCTTCGGTGA TGATTCCTGC
TTACAATTCG GTGGTGGTAC TTTAGGCCAC CCTTGGGGTA ATGCTCCTGG TGCAACAGCT
AACCGTGTAG CTCTGGAAGC TTGTATCCAA GCTCGTAACG AAGGTCGCAA CTTGTTCCGT
GAAGGTGGCG ATGTAATTCG TGAAGCTGCT AAGTGGTCTC CTGATTTGGC CGTTGCTTGT
GAACTCTGGA AAGAAATTAA GTTCGAGTTC GAGGCTATGG ACACCCTCTA A
 
Protein sequence
MSYAKTQTQS KSGYQAGVKD YKLTYYTPDY IPKDTDLLAA FRMSPQPGVP PEEAGAAVAA 
ESSTGTWTTV WTDLLTDLDR YKGRCYDIES VPGEDNQYIC YVAYPLDLFE EGSVTNMLTS
IVGNVFGFKA LRSLRLEDLR IPVAYLKTFQ GPPHGITVER DKLNKYGRPL LGCTIKPKLG
LSAKNYGRAV YECLRGGLDF TKDDENINSQ PFMRWRDRFL FAQEAIEKAQ AETGEIKGHY
LNVTAPTCEE MLERADFAKE IGTPIIMHDY LTGGFTANTT LAKWCRRNGV LLHIHRAMHA
VIDRQKAHGI HFRVLAKCLR MSGGDHLHSG TVVGKLEGEK GITMGFVDLM REDHVEQDRE
RGIYFTQDWA SMPGVMPVAS GGIHVWHMPA LVEIFGDDSC LQFGGGTLGH PWGNAPGATA
NRVALEACIQ ARNEGRNLFR EGGDVIREAA KWSPDLAVAC ELWKEIKFEF EAMDTL