Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_4410 |
Symbol | rbcL |
ID | 4246063 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | - |
Start bp | 6791736 |
End bp | 6793166 |
Gene Length | 1431 bp |
Protein Length | 476 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 638109294 |
Product | ribulose bisophosphate carboxylase |
Protein accession | YP_723871 |
Protein GI | 113477810 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1850] Ribulose 1,5-bisphosphate carboxylase, large subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTTACG CTAAAACACA AACTCAGTCT AAATCTGGGT ATCAGGCTGG AGTAAAAGAC TATAAACTGA CTTACTATAC CCCTGATTAC ATACCAAAAG ATACAGACCT TTTAGCAGCT TTCCGTATGA GTCCTCAACC TGGAGTTCCT CCAGAAGAAG CTGGTGCTGC AGTGGCTGCT GAATCTTCTA CTGGTACTTG GACAACAGTA TGGACTGACT TATTGACTGA CCTTGATCGC TACAAAGGTC GTTGTTATGA TATTGAATCT GTTCCTGGTG AAGATAATCA ATATATTTGC TATGTAGCTT ATCCTCTAGA TTTATTTGAG GAAGGCTCTG TAACTAATAT GTTAACCTCT ATTGTCGGTA ACGTATTTGG TTTCAAAGCA CTACGGTCAC TACGTCTGGA AGACTTAAGG ATTCCAGTTG CTTACCTGAA GACTTTCCAA GGCCCTCCTC ACGGTATTAC TGTTGAGCGT GATAAATTAA ATAAATATGG TCGTCCTTTA TTAGGTTGTA CTATTAAGCC TAAGTTAGGT TTATCCGCTA AGAACTACGG TAGAGCAGTT TATGAGTGCT TACGTGGAGG CTTAGACTTC ACCAAGGATG ACGAAAATAT TAACTCTCAA CCTTTCATGC GCTGGCGCGA TCGCTTCCTA TTCGCTCAAG AAGCTATTGA AAAGGCCCAA GCCGAAACAG GTGAAATTAA AGGTCACTAC CTCAACGTAA CTGCCCCTAC CTGTGAAGAA ATGTTAGAGC GTGCAGATTT TGCTAAGGAG ATTGGTACTC CAATCATTAT GCACGACTAT CTAACAGGTG GTTTTACAGC TAATACAACT CTAGCGAAAT GGTGCCGTCG TAATGGTGTA TTATTACACA TTCACCGGGC AATGCACGCT GTTATTGACC GTCAGAAAGC CCACGGTATT CACTTCCGGG TTTTAGCTAA GTGCTTGAGA ATGTCTGGTG GTGACCACCT CCACTCAGGT ACTGTGGTTG GAAAGCTCGA AGGTGAAAAA GGCATTACAA TGGGCTTTGT AGACTTAATG CGGGAAGACC ACGTTGAGCA AGACCGGGAA CGTGGTATTT ACTTTACTCA AGATTGGGCT TCTATGCCTG GTGTAATGCC AGTAGCTTCT GGTGGTATTC ACGTTTGGCA TATGCCAGCT CTAGTAGAAA TCTTCGGTGA TGATTCCTGC TTACAATTCG GTGGTGGTAC TTTAGGCCAC CCTTGGGGTA ATGCTCCTGG TGCAACAGCT AACCGTGTAG CTCTGGAAGC TTGTATCCAA GCTCGTAACG AAGGTCGCAA CTTGTTCCGT GAAGGTGGCG ATGTAATTCG TGAAGCTGCT AAGTGGTCTC CTGATTTGGC CGTTGCTTGT GAACTCTGGA AAGAAATTAA GTTCGAGTTC GAGGCTATGG ACACCCTCTA A
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Protein sequence | MSYAKTQTQS KSGYQAGVKD YKLTYYTPDY IPKDTDLLAA FRMSPQPGVP PEEAGAAVAA ESSTGTWTTV WTDLLTDLDR YKGRCYDIES VPGEDNQYIC YVAYPLDLFE EGSVTNMLTS IVGNVFGFKA LRSLRLEDLR IPVAYLKTFQ GPPHGITVER DKLNKYGRPL LGCTIKPKLG LSAKNYGRAV YECLRGGLDF TKDDENINSQ PFMRWRDRFL FAQEAIEKAQ AETGEIKGHY LNVTAPTCEE MLERADFAKE IGTPIIMHDY LTGGFTANTT LAKWCRRNGV LLHIHRAMHA VIDRQKAHGI HFRVLAKCLR MSGGDHLHSG TVVGKLEGEK GITMGFVDLM REDHVEQDRE RGIYFTQDWA SMPGVMPVAS GGIHVWHMPA LVEIFGDDSC LQFGGGTLGH PWGNAPGATA NRVALEACIQ ARNEGRNLFR EGGDVIREAA KWSPDLAVAC ELWKEIKFEF EAMDTL
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