| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_4392 |
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| Symbol | |
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| ID | 4246045 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Trichodesmium erythraeum IMS101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008312 |
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| Strand | - |
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| Start bp | 6765304 |
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| End bp | 6766785 |
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| Gene Length | 1482 bp |
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| Protein Length | 493 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 638109276 |
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| Product | alpha amylase, catalytic region |
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| Protein accession | YP_723853 |
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| Protein GI | 113477792 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.47907 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAATTC AAACACCAGA ATGGGTTAAA CAGGCTGTAT TTTACCAAAT TTTTCCAGAT
CGTTTTGCTA AAGCTCAACC AACGACTGAA ACTGGAAAAG GAATAGACAA AGGTTGGTAT
CCCAGCAGTC TAGAACCTTG GGATGAATAT CCTACTCCTC AAGGTTATAA AGGAGGGAAC
CTCTGGGGTG TCATTAAAAA ACTTGACTAT CTTCAGGAAC TTGGTATCAC AGCTATTTAC
TTTACACCAA TTTTTCAGTC AACCTGTAAC CACCGCTATC ATACTCATGA CTATTATCGA
GTCGATCCAA TTTTAGGAGG TAATGAGGCT TTAAGGGTAT TAATAGATAC TGCTCACGAT
CGCAATATTA AAGTGGTTCT TGATGGAGTT TTCAACCACG CTAGCCGGGG TTTTTATTTC
TTTAACGATA TCCTGGAAAA CGGTCCTTAT TCTCCCTGGT TGCATTGGTT CAAAATAGAA
AATTGGCCTC TGTCTGCTTA CGATGGTAGT TTACCTGCTA ATTATGTGGG TTGGTTAGAT
AACCGTGCTT TACCTGTTTT TAATCATGAC AACCCAGAGG TCAAAGAATA CATTATGGAA
ATTGGAGAAT ATTGGTTAAA ATTTGGTATT GATGGTTGGC GGTTGGATGT ACCTTTTGAA
GTGAAGACTC CCGGGTTTTG GCAAGAATTT CGCGATCGCG TTAAGGCTAT TAACCCAGAA
GCATATATTG TGGGTGAAGT CTGGAGTAAC TGCGCACAAT GGTTGGATGG TACTCAGTTT
GATGGAGTGA TGAATTACTT ATTTACTGGT CCAACTATTG CTTTTACTGT AGGCGATCGT
GTGGATCTTG AGCAAATTGA AGGCCGTGAC TATGTAGCTT ATCCGGCTAT ATCTGCTGTT
GAATACGGTC AAAAAATGCA GGAGTTACTG CAACTTTACC CTTGGGAAAT TCAATTAACT
CAACTCAATT TATTAGATAG TCATGATACA GCTAGAGTTT TGAGTATTGC TAAAGGGGAT
AAAGCAAGTG TTGAATTAGC GACTCTGTTG TTAATGACTT TTCCCGGAGC ACCAAGTATT
TATTATGGTG ATGAGGTAGG TTTACCGGGT AAGTTTGACC CTGACTGTCG TCGTAGTTTT
CCTACTACTG AAAAATGGGA TCGTGAAGTT CTGGAATATC ATAAACAGTT AATTGCTATT
AGAAAAGAAT ATTCAGCTTT GCGCACTGGT AATTACGAAG TGTTGTTTGC CGAGGGAAAT
GTTTATATTT TTGCTCGTAT TTTAGAAGAG GAAGAAATTA TTGTAGCTGT TAACATTGGT
ATAGAAGCAG CAAAAGTAAA TGTTATTTTT AATAAGCTTA AATCTCAACC TAATAAAGTT
GTTTATGGTA GTTGTAAAAT TTCCTGGCAA GGAGGAGATG AAGCTAGTAA ATTAGAGTTA
TATTTGCCAG GAAGAAAAGG TTGTATTTTG GTTAAAGATT AA
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| Protein sequence | MQIQTPEWVK QAVFYQIFPD RFAKAQPTTE TGKGIDKGWY PSSLEPWDEY PTPQGYKGGN
LWGVIKKLDY LQELGITAIY FTPIFQSTCN HRYHTHDYYR VDPILGGNEA LRVLIDTAHD
RNIKVVLDGV FNHASRGFYF FNDILENGPY SPWLHWFKIE NWPLSAYDGS LPANYVGWLD
NRALPVFNHD NPEVKEYIME IGEYWLKFGI DGWRLDVPFE VKTPGFWQEF RDRVKAINPE
AYIVGEVWSN CAQWLDGTQF DGVMNYLFTG PTIAFTVGDR VDLEQIEGRD YVAYPAISAV
EYGQKMQELL QLYPWEIQLT QLNLLDSHDT ARVLSIAKGD KASVELATLL LMTFPGAPSI
YYGDEVGLPG KFDPDCRRSF PTTEKWDREV LEYHKQLIAI RKEYSALRTG NYEVLFAEGN
VYIFARILEE EEIIVAVNIG IEAAKVNVIF NKLKSQPNKV VYGSCKISWQ GGDEASKLEL
YLPGRKGCIL VKD
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