Gene Tery_4375 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_4375 
Symbol 
ID4246028 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp6743091 
End bp6743648 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content33% 
IMG OID638109262 
ProductHAD family phosphatase 
Protein accessionYP_723839 
Protein GI113477778 
COG category[R] General function prediction only 
COG ID[COG2179] Predicted hydrolase of the HAD superfamily 
TIGRFAM ID[TIGR01662] HAD-superfamily hydrolase, subfamily IIIA
[TIGR01668] HAD superfamily (subfamily IIIA) phosphatase, TIGR01668 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.429984 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.144366 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGTTGGG GTAAACTTTT ACAACCAGAT TTAGTTCTGG GTAACTCAGT CTTAAGTCTA 
ACATTAGAAA TTCTCCAAAA ATATCAAATT CAAGGTTTGG TGTTAGATGT AGATGAGACT
ATTGTGCCAA TTCACCATAG TCAAGCTTCT CCTGAATTAG CTGTGTGGGT AGAAAAAATT
AAAAGTGTAG CAAGTTTATG GTTAGTCAGT AATAATCTTA GTCAAGATAG AATAGGTCGA
ATTGGTGATT TACTCAATAT ACCTTATATT ACTGCTGCTG GGAAACCTTC TCGTCGTAAG
TTAAAAAAGG CTGTTGATGC GATGAATTTA CCAGTAGAAA AAGTTGCTAT GGTAGGCGAT
CGCTTGTTTA CTGATGTTTT AGCAGGAAAT CGTTTAGGAA TGTTTACTAT TCTTGTTGAA
CCTATATCTA GTAATGGTTT AGAATTTTCT AACTATAAAG TTCGTTCTTT TGAAGTATGG
GTTTCTCAAA TATTAGGAGT ATCTTTGAAT TTGACTACTC ACTCTTTGAT TTATGATCAT
AAAAATGATT TTATGTAA
 
Protein sequence
MCWGKLLQPD LVLGNSVLSL TLEILQKYQI QGLVLDVDET IVPIHHSQAS PELAVWVEKI 
KSVASLWLVS NNLSQDRIGR IGDLLNIPYI TAAGKPSRRK LKKAVDAMNL PVEKVAMVGD
RLFTDVLAGN RLGMFTILVE PISSNGLEFS NYKVRSFEVW VSQILGVSLN LTTHSLIYDH
KNDFM