| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_4346 |
|---|
| Symbol | |
|---|
| ID | 4245998 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Trichodesmium erythraeum IMS101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008312 |
|---|
| Strand | - |
|---|
| Start bp | 6699593 |
|---|
| End bp | 6700990 |
|---|
| Gene Length | 1398 bp |
|---|
| Protein Length | 465 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 638109233 |
|---|
| Product | pheophorbide a oxygenase |
|---|
| Protein accession | YP_723811 |
|---|
| Protein GI | 113477750 |
|---|
| COG category | [P] Inorganic ion transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG4638] Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.18517 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTGCTA ATACCATCAA AAAATCCGAC AATATTCCTG TAAGTGCAGG TGGAACAGAC
CCAGAATATT TTGATTGGCA AGAAGTTTGG TATCCAATTT ATTATATAGA AGACTTAGAG
AAAAATAAAC CTACAACATT TACATTATTA GAACAAGATC TTGTGATTTG GTGGGAAGAA
AAAAACAATC AATGGCGGGT ATTTGAAGAT CAATGTCCCC ATCGTTTAGC ACCCCTTTCT
CAAGGTAGAA TTAATGAGGC TGGATGCTTA GAATGCCCCT ATCATGGTTG GGCATTTTCA
GGGGGAGGAA ATTGTGAAAT TATTCCTCAA CAAATTGCAG GAGGAAAGGC AGAAAAATCA
TCAAGAGCAA AAGTTAAATC TCTACCTACA AAAGTTTGTC AAGGTCTTTT ATTTGTCTAT
GCAGGAAAAA TCGAAAATGC TGCTCAAACA CCTATTCCTA AAGTTGATGT TTTAGATGAA
AATTCTAATG AATGGATTTG TTTAAATACT TTTCGAGATG TACCTTATGA TGGTTTAACA
TTAATGGAAA ATGTCTTAGA TGCTAGTCAT ATTCCTTATA CTCATCATCG TACTGTGGGA
AACCGCGCTA ATGTTGCTCC TGTAGAATTA GAAGTTTTAG AATCTGGAAA ATGGGGTTTT
AAAGGGGTCT GGGAAGAAGG TCCAAGAAAA GGAACTTTAG GAAGACAAGA GACTACTTTT
ATTGCTCCTG GAATGATGTG GCATGACCTT ACTTCTAAAC AATTTGGTCG TACATTAACA
GTTGTATATG CAACACCTAT TCGTAAAGGA GAATGTCGTT TATTTGCCCG TTTCCCTTTT
AAGTTTTCTT CTCCCTTACC GAAATTTTTT ATTCAGTTAA GCCCCCGTTG GTATTCTCAT
ATTGGGCAAA ATGGAGTATT GGAAGATGAC CAAATATTTT TACATTATCA AGAACGATAT
TTAGAAGCAA AGGGTGGTAG TGCTAATTTT TCTAAGGCTT TTTATTTACC TACAAAAGCA
GATTTATTTG TATTTGAATT GCGTTCTTGG GTGAATAAAT ATAATGCTCA ATTATTTCCT
AATGCAACTT TAAGTTCTGC TCTGAACTCA GAAATATTGT TAGATAGGTA TCATTCTCAT
ACTAAAAAAT GTAGTAGTTG TCGCAGAGCT TTAAAAAATT TACAACGAAT AAAGGTTGGA
GTCGTGCTTG TGACTTCATT TATCTGGGCA AGTATTTTTT TTATGCTGTT AATATTAGAT
GATTTTAATA TGACTTTGAT GACTTTTTTG ATTTTAAGTT TGCCTGTTGG AGTTGTTTTT
TGGTTACTGT TAAGTAAATT AGAAAAACAG TTTTATCAAG GACGAGAAAT ACCTCCAAGA
AATTTATTAA ATAATTGA
|
|---|
| Protein sequence | MIANTIKKSD NIPVSAGGTD PEYFDWQEVW YPIYYIEDLE KNKPTTFTLL EQDLVIWWEE
KNNQWRVFED QCPHRLAPLS QGRINEAGCL ECPYHGWAFS GGGNCEIIPQ QIAGGKAEKS
SRAKVKSLPT KVCQGLLFVY AGKIENAAQT PIPKVDVLDE NSNEWICLNT FRDVPYDGLT
LMENVLDASH IPYTHHRTVG NRANVAPVEL EVLESGKWGF KGVWEEGPRK GTLGRQETTF
IAPGMMWHDL TSKQFGRTLT VVYATPIRKG ECRLFARFPF KFSSPLPKFF IQLSPRWYSH
IGQNGVLEDD QIFLHYQERY LEAKGGSANF SKAFYLPTKA DLFVFELRSW VNKYNAQLFP
NATLSSALNS EILLDRYHSH TKKCSSCRRA LKNLQRIKVG VVLVTSFIWA SIFFMLLILD
DFNMTLMTFL ILSLPVGVVF WLLLSKLEKQ FYQGREIPPR NLLNN
|
|---|
| |