Gene Tery_4342 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_4342 
Symbol 
ID4245994 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp6693568 
End bp6694863 
Gene Length1296 bp 
Protein Length431 aa 
Translation table11 
GC content41% 
IMG OID638109229 
Productpeptidase M16-like 
Protein accessionYP_723807 
Protein GI113477746 
COG category[R] General function prediction only 
COG ID[COG0612] Predicted Zn-dependent peptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.472968 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTTCAA CTTTAGTCCC ACCGACCCTC TCCTATCTTA ATACCCCCAC TGTTCGTCAA 
TTACCAAATG GACTAACCAT CATCGCCGAA CACCTGGCAG TTGAAGCTGT GAACCTCAAT
ATATGGCTTA ATGTTGGTTC CGCTTTAGAA TCTGAATCTA TCAACGGAAT GGCCCATTTT
CTGGAACATA TGGTTTTCAA AGGTACCCCC AAGCTTCCTA GTGGAGAATT TGAACGTTTA
GTAGAACAAA AAGGAGGCTT AATGAATGCT GCCACCAGTC AAGACTACAC TTACTTTTAC
ATTACCACCG CTCCCAAAGA CTTTGCTAAG TTAGCACCTT TGCAATGGGA GATACTCCTC
AACCCGAGTA TTGCTGATGA TGCTTTTGAA CAAGAGCGGC TTGTTGTACT TGAAGAAATT
CGGCGTTCAG ATGATAGCCC TAGCCGTCGT TGTTACCAAA AAGTCATTGA AACTGCTTTT
GAAAAATTAC CTTATCGTCG CCCAGTATTG GGTCCGCCAG AAATTATCTC TCAACTACAA
ACTCAACAAA TGCGAGATTT TCACCAGAGT TTGTATAAAC CGAGTTCTAT GACTGCTACT
GTTGTCGGAA ATTTGCCGGT GGAAGAATTA ATTGATATTG TTACAGACTC GTTTACGGAA
GCGAATAATG GTAAAAGTAC TTCAGAAACT TTATTGCCAC CGAATATCAA TTTTACACCA
GAGTCACCTT TTACAAAAAT AGTTCGCCAT GAAGTGGTTG ATGAAGCTCT TCAGCAACCA
AGGTTAATTA TGTTTTGGCG GGTACCTGGG TTAACCGAGT TATATGAAAC TTATGCGTTG
GATGTGTTAG CAACTATTTT GGGTGGGGGG AAAACATCTC ACCTGGTGCG TGACTTACGG
GAAGAACGAG GTTTAGTTTA TTCTATTGGT ATCAGTAATG TAAGTCATCG TTATCAAGGT
CTTTTTTATG TTTCTGCAAG ACTGCCAGAG GAAAATTTAG CTGAAGTGGA AGCAGCGATC
GCTCATCATA TTTATACTAT TCAACAGGAG TCGGTAACAG ATGCAGAAAT GCAACGTATT
CGCACGTTGG TGGCGAAGAG ATTTATTTTT GCTAATGAGA CACCAAGCGA TCGCGCGAGT
TTATATAGTT ATTATCAGTC AATGGTCGGA GACTTAGGAT CTGCTATTAA CTATCCCCAG
AATATTCAGG CATTTGAGTC ATCAGATATT CAACAAGCAG CGTTGAAGTA TTTATCTGTT
GATGCTTATG GAGTAGCAGT TTTTCGACCT AAGTAG
 
Protein sequence
MTSTLVPPTL SYLNTPTVRQ LPNGLTIIAE HLAVEAVNLN IWLNVGSALE SESINGMAHF 
LEHMVFKGTP KLPSGEFERL VEQKGGLMNA ATSQDYTYFY ITTAPKDFAK LAPLQWEILL
NPSIADDAFE QERLVVLEEI RRSDDSPSRR CYQKVIETAF EKLPYRRPVL GPPEIISQLQ
TQQMRDFHQS LYKPSSMTAT VVGNLPVEEL IDIVTDSFTE ANNGKSTSET LLPPNINFTP
ESPFTKIVRH EVVDEALQQP RLIMFWRVPG LTELYETYAL DVLATILGGG KTSHLVRDLR
EERGLVYSIG ISNVSHRYQG LFYVSARLPE ENLAEVEAAI AHHIYTIQQE SVTDAEMQRI
RTLVAKRFIF ANETPSDRAS LYSYYQSMVG DLGSAINYPQ NIQAFESSDI QQAALKYLSV
DAYGVAVFRP K