Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_4341 |
Symbol | |
ID | 4245993 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | - |
Start bp | 6692391 |
End bp | 6692939 |
Gene Length | 549 bp |
Protein Length | 182 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 638109228 |
Product | Allergen V5/Tpx-1 related |
Protein accession | YP_723806 |
Protein GI | 113477745 |
COG category | [S] Function unknown |
COG ID | [COG2340] Uncharacterized protein with SCP/PR1 domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.135556 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATCATA AATATTTACA ACAATTTGTC TGGATTATGG TAATATTTTT GAGTAGTTGT AATTATCAAA AATCAATCCA AAGTTTTTCA GAAATGCAAG ACAATTTATA CCCAAAAAAA AATTATATTT CCAGTACAAA TCTAGCAGCA TCACAAAATA TTAAAGAGTT AGAAAAAAAC ACATTTACCC TGATAAATCA ATATCGACAA TCTAAAAATT TACCGGCATT ACAGTGGAAT AATGATATTG TTCAACAATC AAGAATTCAT GCTCAACAAA TGGCTAGTGG AAAAACAACT TTTAGCCATG ATGGTTTTAA AAAAAGAGTA GAAATAATTA GTCAAAAAAT TCCTTACAAG GGTGCTGCTG AAAATATAGC TTCTAACCAA GGTTATAGTG ACCCTGCAGA AGCAGCAGTG AAGGGTTGGA TCAAAAGTCC TGGTCATCAT AAAAATATAG TGGGGGACTA TAATTTAACT GCTATTGGTA TTGCTCAAAA TTCTCAAGGA ATGTATTATT TCAATCAGCT TTTTATTAAA ACTAGGTAG
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Protein sequence | MNHKYLQQFV WIMVIFLSSC NYQKSIQSFS EMQDNLYPKK NYISSTNLAA SQNIKELEKN TFTLINQYRQ SKNLPALQWN NDIVQQSRIH AQQMASGKTT FSHDGFKKRV EIISQKIPYK GAAENIASNQ GYSDPAEAAV KGWIKSPGHH KNIVGDYNLT AIGIAQNSQG MYYFNQLFIK TR
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