Gene Tery_4341 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_4341 
Symbol 
ID4245993 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp6692391 
End bp6692939 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content30% 
IMG OID638109228 
ProductAllergen V5/Tpx-1 related 
Protein accessionYP_723806 
Protein GI113477745 
COG category[S] Function unknown 
COG ID[COG2340] Uncharacterized protein with SCP/PR1 domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.135556 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCATA AATATTTACA ACAATTTGTC TGGATTATGG TAATATTTTT GAGTAGTTGT 
AATTATCAAA AATCAATCCA AAGTTTTTCA GAAATGCAAG ACAATTTATA CCCAAAAAAA
AATTATATTT CCAGTACAAA TCTAGCAGCA TCACAAAATA TTAAAGAGTT AGAAAAAAAC
ACATTTACCC TGATAAATCA ATATCGACAA TCTAAAAATT TACCGGCATT ACAGTGGAAT
AATGATATTG TTCAACAATC AAGAATTCAT GCTCAACAAA TGGCTAGTGG AAAAACAACT
TTTAGCCATG ATGGTTTTAA AAAAAGAGTA GAAATAATTA GTCAAAAAAT TCCTTACAAG
GGTGCTGCTG AAAATATAGC TTCTAACCAA GGTTATAGTG ACCCTGCAGA AGCAGCAGTG
AAGGGTTGGA TCAAAAGTCC TGGTCATCAT AAAAATATAG TGGGGGACTA TAATTTAACT
GCTATTGGTA TTGCTCAAAA TTCTCAAGGA ATGTATTATT TCAATCAGCT TTTTATTAAA
ACTAGGTAG
 
Protein sequence
MNHKYLQQFV WIMVIFLSSC NYQKSIQSFS EMQDNLYPKK NYISSTNLAA SQNIKELEKN 
TFTLINQYRQ SKNLPALQWN NDIVQQSRIH AQQMASGKTT FSHDGFKKRV EIISQKIPYK
GAAENIASNQ GYSDPAEAAV KGWIKSPGHH KNIVGDYNLT AIGIAQNSQG MYYFNQLFIK
TR