| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_4336 |
|---|
| Symbol | |
|---|
| ID | 4245988 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Trichodesmium erythraeum IMS101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008312 |
|---|
| Strand | - |
|---|
| Start bp | 6683811 |
|---|
| End bp | 6684374 |
|---|
| Gene Length | 564 bp |
|---|
| Protein Length | 187 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 31% |
|---|
| IMG OID | 638109223 |
|---|
| Product | pentapeptide repeat-containing protein |
|---|
| Protein accession | YP_723801 |
|---|
| Protein GI | 113477740 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1357] Uncharacterized low-complexity proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.789922 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTATCA ACCGAATCGA GATTAGCTCT AAAAATATTA AGATAGAGAA TATGAATGCA
GAGGAATTAC TATGGAGATA TGCAGAGGGT CAAAGAGAAT TTTCTGGTAT TGATTTAAGT
AATATAGAGT TATTTGAAGC TAATTTAGAA GGAATTAATT TAGAAGGTTG TAATTTAACA
AGAGCTTATC TTCCTTATGC AAATTTGAAT CAAGCTAACC TCCAAGGATG TAATTTACTA
GAAGTAAAAA TGGGAGATAT TCAACTTTAT AAAGCCAACT TATCAAATAC TAATATTCAA
CAGGGACATC TATCAAGAGC TAATTTGCGT CATGCTAATC TTCAAGGTGC AAATTTGAGG
GGAATTAATT TACAAGGTGC AAACTTATAC CATGCAAACT TAAGAGATAC AGATTTAAGG
TATGGAGATT TGAGAGGAAC TAACCTAGAA AAAGCTAAGT TAGATAATGC TAAATTGGGA
TGGTGTAATT TATTTAGAGC AAGAATTGTT GATTTATCAA TGGCAGAATA CGATCATACT
ACTATCAATC CTAATGGATA TTGA
|
|---|
| Protein sequence | MIINRIEISS KNIKIENMNA EELLWRYAEG QREFSGIDLS NIELFEANLE GINLEGCNLT
RAYLPYANLN QANLQGCNLL EVKMGDIQLY KANLSNTNIQ QGHLSRANLR HANLQGANLR
GINLQGANLY HANLRDTDLR YGDLRGTNLE KAKLDNAKLG WCNLFRARIV DLSMAEYDHT
TINPNGY
|
|---|
| |