Gene Tery_4333 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_4333 
Symbol 
ID4245985 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp6679384 
End bp6680361 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content39% 
IMG OID638109220 
ProductLysR family transcriptional regulator 
Protein accessionYP_723798 
Protein GI113477737 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTCTAG AGCAATTGCA AGCGTTTCTA TGGGTTGCAG AAACGGGTAG CTTTCAAGAA 
GCAGCACAAA AATGTAATGT CACCCAATCA ACAGTCAGTC GGCAAGTGCA AGCCTTAGAG
GCAGAAGTAG GTGCTATCTT ATTTCACCGT AGCAACCAAG CTAAACTAAC CTTAGCAGGA
GAATGTTTGT GGCCTCATGC TAGAAAAATT TGTCAAGCTT GGGAAAATGC TACTCAAGAA
ATAGCAGAAA TGTTCACCGG AAAACAACCA GAATTATGTA TTGCAACTAT TCACTCTGTC
TGTGCTAACT ACCTACCTCC AGTTTTGCAA AGATTTGGTC GCCACTATCC AGAAGTTAAA
TTACGAGTAA CTGCCCTAGG AAGCGATCGC ATCCTCAAAG TTCTCAAAGA CGGTCTAGTA
GATGTAGCGA TCATTATGAA TAATGACTTA TTTACCCCCA CTTCAGAAAT GATAGTACAT
CATCTATACA CTGAAACCAT AGAAGTATTA ATGGCAGCAA ACCATACCCT TGCTAAATAC
AAAGAAATAC CCTGGGCAGA ACTTATTTAC TACCCTCAAG TTATCTTCAA AGATGGGTAT
GGAATGCAGA GATTAGTCAA AGAACAATTT GAGCAATTAG GGGCAAAACT GAACGCAACA
TTAGAGTTAA ATACCCTTGA TGCTTTCCGA GGAGTAGTTA GACAAGGAAA TTTAATTGCT
TTACTGCCCA GTTCAGCTCT ACTAGATGCC AGAGTTGATC CCACTCTAGC AATTAGAACA
ATAGCTAAAA CTCCTAACAT TTCTAAGATC TCTTCAACTA AAGATTCTGT TTGGAGTCGT
GATGTAGTTT TAGTCACAAC TAGCGATAGG ATGAAAATTC CACCAATAAA ATATTTTTGC
AAGTTAGTTA AAGAAATAAT TCCACCAAGA GTCACTCAAG TTAAAAGTTC AAAGTTAAAA
GTTCAAAGTC ATCTCTGA
 
Protein sequence
MRLEQLQAFL WVAETGSFQE AAQKCNVTQS TVSRQVQALE AEVGAILFHR SNQAKLTLAG 
ECLWPHARKI CQAWENATQE IAEMFTGKQP ELCIATIHSV CANYLPPVLQ RFGRHYPEVK
LRVTALGSDR ILKVLKDGLV DVAIIMNNDL FTPTSEMIVH HLYTETIEVL MAANHTLAKY
KEIPWAELIY YPQVIFKDGY GMQRLVKEQF EQLGAKLNAT LELNTLDAFR GVVRQGNLIA
LLPSSALLDA RVDPTLAIRT IAKTPNISKI SSTKDSVWSR DVVLVTTSDR MKIPPIKYFC
KLVKEIIPPR VTQVKSSKLK VQSHL