Gene Tery_4327 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_4327 
SymbolgroEL 
ID4245979 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp6670078 
End bp6671712 
Gene Length1635 bp 
Protein Length544 aa 
Translation table11 
GC content42% 
IMG OID638109215 
Productchaperonin GroEL 
Protein accessionYP_723793 
Protein GI113477732 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0459] Chaperonin GroEL (HSP60 family) 
TIGRFAM ID[TIGR02348] chaperonin GroL 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.645492 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTAAAC GTATTATCTA CAACGAAAAT GCTCGTCGCG CCTTAGAAAA AGGTATGGAT 
ATTCTTGCGG AGTCTGTAGC AGTAACACTC GGTCCTAAAG GTCGAAACGT TGTTCTTGAG
AAAAAATTTG GCGCACCCCA AATTGTTAAT GATGGTGTAA CAATTGCTAA AGAAATTGAA
TTGGAAGACC ATGTAGAAAA TACTGGTGTT TCCCTAATTC GTCAAGCAGC TTCCAAAACT
AACGATGCAG CAGGTGATGG TACAACCACT GCAACTGTAC TTGCTCATGC AATGGTAAAA
GAAGGTCTAC GGAACGTGGC TGCTGGCGCA AACCCTATTG CTCTCAAGCG TGGTATTGAC
AAAGCTGCTG GTTTTCTAGT AGAAAAAATT GCTGAACATG CTCGTCAAAT TGAAGATTCC
AAGGCGATAG CTCAAGTTGG TGCTATTTCT GCTGGTAATG ATGAAGAAGT AGGTAAAATG
ATTGCCGAAG CCATGGATAA AGTGGGTAAA GAAGGTGTGA TTTCTCTTGA AGAAGGAAAG
TCAATGCAGA CTGAGTTGGA AATTACTGAA GGTATGCGCT TTGACAAGGG TTACATCTCT
CCCTACTTCG CAACAGACAT GGAACGGATG GAAGCTTCTC TTGAAGAACC TCAGATTCTG
ATAACTGATA AGAAAATTGC TTTAGTACAA GACTTAGTAC CAGTATTAGA ACAAGTTGCT
CGTTCTGGCA AACCATTATT AATATTGGCT GAAGATATTG AGAAAGAAGC TTTGGCAACC
CTAGTTGTTA ACCGTTTACG GGGTGTAGTG AATGTTGCTG CAGTTAAAGC TCCTGGTTTT
GGGGATCGTC GTAAAGCTAT GTTAGAAGAT ATCGCGGTAT TAACTGGCGG TCAAGTTATC
ACTGAAGATG CTGGCTTGAA ACTAGAAAAT GCCAAGTTAG ATATGCTTGG TAAAGCACGT
CGCATTACGA TCACTAAAGA TAATACTACT ATCGTTGCTG AAGGTAACGA AAAAGAAGTT
AAAGCACGTT GCGAACAAAT TCGTCGTCAA ATGGATGAAA CTGACTCTTC CTACGACAAA
GAGAAATTAC AAGAGCGTTT AGCTAAATTA GCTGGTGGTG TAGCGGTTGT TAAAGTTGGT
GCTGCTACTG AAACAGAAAT GAAAGATCGC AAGTTACGCT TGGAAGATGC TATCAACGCA
ACTAAAGCTG CTGTAGAAGA AGGTATCGTT CCTGGTGGTG GTACAACTCT AGCGCACTTA
GCTCCTGAGT TGGAAACTTG GGCAAATGAA AATCTACAAT CTGAAGAGTT AACTGGTTCT
TTAATTGTTA GTCGTGCTTT ATTAGCTCCA CTGAAGCGCA TTGCTGAAAA TGCTGGGCAA
AATGGTGCTG TAATTGGCGA ACGGGTGAAA GAGAAGGATT TCAATACTGG TTTTAATGCA
GCAAACAATG AGTTTGTTGA TATGTTTGAA GCTGGTATTG TTGACCCAGC GAAGGTAACT
CGTTCGGCTC TACAAAACGC TGCTTCTATT GCTGGTATGG TGTTAACAAC TGAGTGTATT
GTTGTTGACA AACCTGAGCC TAAGGAAAAC GCACCTGCTG GCGCTGGTAT GGGCGGTGGC
GATTTCGATT ACTAA
 
Protein sequence
MAKRIIYNEN ARRALEKGMD ILAESVAVTL GPKGRNVVLE KKFGAPQIVN DGVTIAKEIE 
LEDHVENTGV SLIRQAASKT NDAAGDGTTT ATVLAHAMVK EGLRNVAAGA NPIALKRGID
KAAGFLVEKI AEHARQIEDS KAIAQVGAIS AGNDEEVGKM IAEAMDKVGK EGVISLEEGK
SMQTELEITE GMRFDKGYIS PYFATDMERM EASLEEPQIL ITDKKIALVQ DLVPVLEQVA
RSGKPLLILA EDIEKEALAT LVVNRLRGVV NVAAVKAPGF GDRRKAMLED IAVLTGGQVI
TEDAGLKLEN AKLDMLGKAR RITITKDNTT IVAEGNEKEV KARCEQIRRQ MDETDSSYDK
EKLQERLAKL AGGVAVVKVG AATETEMKDR KLRLEDAINA TKAAVEEGIV PGGGTTLAHL
APELETWANE NLQSEELTGS LIVSRALLAP LKRIAENAGQ NGAVIGERVK EKDFNTGFNA
ANNEFVDMFE AGIVDPAKVT RSALQNAASI AGMVLTTECI VVDKPEPKEN APAGAGMGGG
DFDY