| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_4276 |
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| Symbol | |
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| ID | 4245928 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Trichodesmium erythraeum IMS101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008312 |
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| Strand | - |
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| Start bp | 6594822 |
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| End bp | 6598238 |
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| Gene Length | 3417 bp |
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| Protein Length | 1138 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 638109168 |
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| Product | helicase-like |
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| Protein accession | YP_723746 |
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| Protein GI | 113477685 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0553] Superfamily II DNA/RNA helicases, SNF2 family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.209171 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAATAA CAGAACTGCA ACCAAACATA ATAATTACAG GTTCTTTGTT CTCTGAACCA
GTTCAGATAA TTACTACAAA TCATATGGGG GAATCTATCA AATTAATTGG TAAAGGAACT
CAAACAAATC AAGTTTATGA CCCTATTCTT ACTCCTCAAC AAATTGCTTC TCTTAGTGCT
ATTACCAAGA CCAAACTTTT TGATGGCAAT TCTGCCAGTT TTCGCTTAGG AGTAGAGGCC
TTACGTTGGA AATTAGCCTA CGAATATGAC CCCTATTTTT CCTTAGCGAT CGCTCGTGTA
GACCCCCTAC CTCATCAGTT AGAAGCCGTT TATGATTACT TTCTTAAGTT ACCTCGAATT
AGGTTTCTAC TAGCAGATGA CCCAGGAGCT GGTAAAACTA TTATGGCTGG TTTATTGTTG
AAAGAGTTAA AAATTAGGGG ATTAGTTCAA CGCACATTAA TTGTAGCTCC TGCTAATCTA
ACTTTTCAAT GGCAACGGGA ACTTAAGGAT AAGTTTAGAG AAGATTTTGA AGTAGTAAAA
GGTGACATTC TCAGAGCTAA TTATGGTAAT AATCCTTGGC AAGAAAAATC TCAAATTGTT
ACTTCTGTTT CTTGGGTTTC TCGGATTCAA GATGCTAAAG AAAGTTTATT GCGTTCTAAT
TGGGATTTAA TTATTGTTGA TGAAGCCCAT AAAATGAGTG CTTATAAATC TGATAAAAAA
ACTTTAGCTT ATCAGTTAGG AGAAAAACTA TCAGAAATGA CTGATCATTA TTTATTAATG
ACGGCTACTC CCCACAAAGG TGACCCTAAA AATTTTTGTC TATTTTTAGA ACTATTAGAT
AAAGATGTTT ATGGGGATGT GAGAAGTTTA GAGGAGGCAA TGGTAAACAA TGTAGCTCCT
TTTTATTTAC GCCGAACAAA AGAAGCACTT GTCACATTTC CTGACCCCGA AACTAAGGAA
GTAAAAAAAC TTTTTCCTAA CCGTAAAGTA GAAACTATTG AATTTCAAAT AGATGATGCT
GAATTAGACT TTTACGATGC TCTAACTCGC TATGTTGAAG ACCAATCAAT TAAAGCTTCT
AAAGATAATT CTGCTAGGGG AAGAGCATTA GGTTTTACTA TGGCAATGCT ACAACGTCGG
TTTGCTTCTA GTATGTTTGC TATCCGTCGC AGTTTGGAAC GGATGAAAGA AAAACGACAA
AAAATTATCG ATGATCCTCA AGGTTATCGA GAACAAAAAA TTAGTCGTCA TTTGCCTAAT
GATTTTGAGG ATTTAACTGA GCAGGAACAG AATAAAATCA GGGAAAGTTT AGAGTCAGTA
GTAGCTTCAG TAAATCCTGG AAATTTACAA GATGAAATTG CTCAATTAAC CAGGTTAATT
TATTTAGCTT TAGAGTTAGA AAAACGGGAA ATAGAATCAA AATTAGTCAA GCTAAAAGAA
ATAATAACTA GCAAAGGTAT TTTCCAAGAC CGGAAGATGA AACTATTAAT TTTTACCGAA
CATAAAGACA CATTAGATTA TTTGGTTGGC AAACTTCGAG GCTGGAAATT ATCAGTAACT
CAAATTCATG GGGGGATGAA AATAGGAGAC CGGGATACTC CCCAAACTCG TATTTACGCT
GAACGAGAGT TTCGTGAAGA TGCACAGATA TTAGTTGCTA CCGAAGCAGC AGGAGAGGGT
ATTAATTTAC AGTTTTGTTG GCTAACTATT AATTATGATA TTCCCTGGAA CCCAGTCCGT
TTAGAACAAC GTATGGGTAG AACTCACCGT TATGGGCAGG AAAAAGACTG TCTAATTTTT
AACTTTGTTG CTACTAATAC CAGAGAAGGT AGGGTTTTGT GGAAACTGTT TGAACGTATT
TACGCCATCG AAGCTGACTT AGACCCCGAA AATACGGGTA AAGTCTTTAA TGTTTTGGGA
GATATTTTTC CTGCTAACCA ACTAGAAAAG ATGTTACGAG ATATGTATGC TCGTAATATT
AGTGAGGATG GTATCAAAGA TAGAATTGTC CAACAGGTAG ACAGCAAACA TTTTCAAAAA
ATTACTAATT CAGCTTTAGA AGGATTAGCA AAACGGGAGC TTAACCTATC TAAATTAATA
GGTAAGTCTA CTGAAGCTAA GGAAAACCGA CTGATGCCAA GAAGTATTGA AAATTTCTTT
CTCAAAGCTG CTCCCATAGC AGGTATTCAT CCTAAGGAAG TCAAGAAAAA TTCCCACATT
TATCGAGTGG GAAAACTGCC TCGTACTTTG TGGTCTGTGG GCGATCGCTT GGAACCTCAA
TATGGCAAAC TAGGGCGAGA ATATAAAAAA ATTATCTTTG ATAAGGACTT ACTCAAAAGT
GACCCTACCT TGGAATGGGT GACACCGGGG CATCCTTTAT TTGAATGTGT GCGAGAAAAA
GTAGGGGAAA TAGTCACGGA AGATTTACAA CGGGGGGCAA TATTTTATGA TTTGCATCGC
CGGAAACCTA GTTATTTAGA TGTGTTTGCT GCTGCTATTG TGGATGGTCG GGGACGGAAA
CTGCATGAGC GGTTGTTTGT AGTAGAAACA AGGTCTGATG GTGAAATGAT AGTACGTCAA
CCTACTGTGT TTTTAGATTT AGCTGTGGCG GAATTGTCGG AGTTGTCAGA GGTGGATATG
GAAAGACCGA GGTTAGAATG GGTAGAATTG GCTCTATATG AAAAAGCGTT GCAGCCATTC
TTGGCAGAAA ATTTAGCACA ACGTCAGCAG GAAGTCAAGA GTATTCTTAA TCATACAGAG
ATTAGTTTGA ATACAATTAT TGACCGGGTA CAATGCCAGT TTGCTGAGTT ACACGCAGAA
AAGGAAGCGG GTTCTAAGGA GGCAGGGTTA GATGGGCGAA TAAAACAGAT GGATGACCGT
TTGTTTGAGT TGAATGGTAG GTTGGAGTCT CGCCGGGAGG AGTTGGAAAA AGAGGCGAGT
TGTGCTATTT CGGGGGTGCA TCATTATGGT TGCGCTCTGG TTTTGCCCCA TCCAGAACGC
TCTTCTCCAG AGTTAGCTCC TATGGTGAGC GATCGGGATA TTGAGTGTAT TGCTATTGAT
AAGGTAATGG AGTATGAAAG GGGGAGGGGT TGGCAAGTGG AGAGTGTAGA AAACCAAAAT
CGGGGTTTTG ATTTGATTTC TCGGAAACCT CATCCCGAAG ATATTCAAAC GGCTATTAGT
GTAAGATTTA TTGAGGTAAA AGGTAGGGCA ACTGTAGGTA CTGTGGTTTT AACAAATAAT
GAGTATCAAA CTGCTGCTAG GTTGCAAGGA GATTATTGGC TTTATGTAGT TTTTAATTGT
GCGACAAATT CAGAAGTTTA TACGATTAAT AACCCGGTAA AGTTAGGGTG GGAACCTTTG
AATAAGATTG AACATTATCA GGTTGAAGCA AGTAAAATTA TTAGTGCTAG TCAATAA
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| Protein sequence | MQITELQPNI IITGSLFSEP VQIITTNHMG ESIKLIGKGT QTNQVYDPIL TPQQIASLSA
ITKTKLFDGN SASFRLGVEA LRWKLAYEYD PYFSLAIARV DPLPHQLEAV YDYFLKLPRI
RFLLADDPGA GKTIMAGLLL KELKIRGLVQ RTLIVAPANL TFQWQRELKD KFREDFEVVK
GDILRANYGN NPWQEKSQIV TSVSWVSRIQ DAKESLLRSN WDLIIVDEAH KMSAYKSDKK
TLAYQLGEKL SEMTDHYLLM TATPHKGDPK NFCLFLELLD KDVYGDVRSL EEAMVNNVAP
FYLRRTKEAL VTFPDPETKE VKKLFPNRKV ETIEFQIDDA ELDFYDALTR YVEDQSIKAS
KDNSARGRAL GFTMAMLQRR FASSMFAIRR SLERMKEKRQ KIIDDPQGYR EQKISRHLPN
DFEDLTEQEQ NKIRESLESV VASVNPGNLQ DEIAQLTRLI YLALELEKRE IESKLVKLKE
IITSKGIFQD RKMKLLIFTE HKDTLDYLVG KLRGWKLSVT QIHGGMKIGD RDTPQTRIYA
EREFREDAQI LVATEAAGEG INLQFCWLTI NYDIPWNPVR LEQRMGRTHR YGQEKDCLIF
NFVATNTREG RVLWKLFERI YAIEADLDPE NTGKVFNVLG DIFPANQLEK MLRDMYARNI
SEDGIKDRIV QQVDSKHFQK ITNSALEGLA KRELNLSKLI GKSTEAKENR LMPRSIENFF
LKAAPIAGIH PKEVKKNSHI YRVGKLPRTL WSVGDRLEPQ YGKLGREYKK IIFDKDLLKS
DPTLEWVTPG HPLFECVREK VGEIVTEDLQ RGAIFYDLHR RKPSYLDVFA AAIVDGRGRK
LHERLFVVET RSDGEMIVRQ PTVFLDLAVA ELSELSEVDM ERPRLEWVEL ALYEKALQPF
LAENLAQRQQ EVKSILNHTE ISLNTIIDRV QCQFAELHAE KEAGSKEAGL DGRIKQMDDR
LFELNGRLES RREELEKEAS CAISGVHHYG CALVLPHPER SSPELAPMVS DRDIECIAID
KVMEYERGRG WQVESVENQN RGFDLISRKP HPEDIQTAIS VRFIEVKGRA TVGTVVLTNN
EYQTAARLQG DYWLYVVFNC ATNSEVYTIN NPVKLGWEPL NKIEHYQVEA SKIISASQ
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