| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_4264 |
|---|
| Symbol | |
|---|
| ID | 4245916 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Trichodesmium erythraeum IMS101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008312 |
|---|
| Strand | + |
|---|
| Start bp | 6577622 |
|---|
| End bp | 6579505 |
|---|
| Gene Length | 1884 bp |
|---|
| Protein Length | 627 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 638109156 |
|---|
| Product | Toll-interleukin receptor |
|---|
| Protein accession | YP_723734 |
|---|
| Protein GI | 113477673 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAAAA AATCAAAACG CGATCGCGGA AGAATTATCA CAACTTCTGG ACTGAAAAAA
TTAAATGAAG CTATTGAAGA GTGGAAACAG AAATACAACC TTAGAGGTAC TCTGGCAGAA
ATTGAGGCAG AGTCAGGAGT TGGTTCAGAT ACTATTAGTA AAATTCGACA AGGACGAGTA
GGTGCAGACC TCAGCAAAAT TCAACAACTT TTTGCTGCTT TTGATCTAAC TTTGGATGAA
ACTGACTACC GCTCCGGAAA ACAAAGCTCA TCTGAAATGG ACTCAGAACC ACTATCACAA
CTACTACCAC TTTTAAACGA CGAACAAATA GTCACTAAAA ATAGTTTCCA AATTTTCATC
AGTTATAACA GGCAAGACCC GGATCAAGAA TTGGCGCGAC AGTTTGAAAC AGCCCTCGCT
GCTGCTGGTC ATCAAGTATT TATGGCAGGA GACCATATTC GTCTGGGAGA AAATTGGTTT
CGTCGAATTA ATATTGAATT GAAACGCTGT GACTATTTGT TGTTATTTTT GCCTCCTCAG
TCAGCACAAA GTGAGTTGCT CACCTATCAA GTGCAACTTG CCAGAGAATT ACAATTTTCC
CGACCAGAGC GTAAACCTGT AATTTTGCCA ATTCGGGTAG GTTTTTCTCT GACTCAACCT
CTCAACCATG ACTTACGTGG TTATCTGTAT CGCATTCAAC AACGGGAGTG GCGATCGCCG
GAAGATACAA TTATTATTCT TAAAGAAGTT TTGACTCTTC TAGCTGCTCC ACCAGGTAAT
ATTGCCCTGG AAATAGAGGA GAAAAAAGAA ATTTCTCTGA GTGAAGAAAT TAGCAGTATC
GCCTCTGCCA ACTTCCCCCC TTTACCCTCT GCAGAACCAG AAATACCAGG GGGACAAATT
GATGTAGCAT CTAATTTTTA TATTGAGCGT CCTCCCATAG AAGAACGTTG TTATCAAACT
ATCTTACAAC CGAGTAGTTT GATTAGAATT AAAGCACCTC GACAGATGGG AAAAACTTCT
TTAATGGCAA GAATTTTACA TCATGCTGCA TTCCAAGGAT ATCGAACAAT ACCTTTGAGT
TTTCAGTTAG TAGATAAAGA AGTTTTTAGT AATCTTGAAA AGTTCTTAAA ATGGTTTTGT
GCTTATGTGG GAAGGGAGTT ACGTTTGCCA AATCAATTAG ATGATTATTG GGATGATATT
TTTGGTAGTA AAGTTAATTG TAAGGATTAT TTTGAGAAAT ATTTATTAGC ACAAATAGAT
CATCCTTTAG TCTTAGGTTT AGATGAAATT GACCGAGTTT TTCAATACCC TGATATTGCC
GAAGATTTTT TAGGATTATT ACGAGCCTGG CATGAAGAGT CAAAACGACG TGCTATTTGG
AAAAAGTTGC GCTTATTAGT AGTTCATTCT ACTGAGGTTT ATATTCCTAT GAATATTAAT
CAATCTCCTT TTAATGTGGG GTTGCCTATA GATTTACCAG AATTTAATCT CCCGCAAGTT
AAGGACTTGG CATTCCGACA TAATTTGAAT TGGTCAGAGC AAGAAGTAGA GAAACTAATG
GCAATTATTG GTGGGCATCC TTATTTAGTT AGGGTGGCAT TATATCACAT TTCTAAACAA
GATTTGACTC TAGAAGATTT ACCGGAAAAT GTAATGAGTG AAACTGGAAT TTATAGCGAC
CATTTGCGAC GACATTTGTG GAATTTAGAA GAATATCCAG AGTTAGTTGC AGCAATGAAA
AATATAATTT CTGAAAATTT GAACGAACGT TTAACAGGGA TATTAGGTTT TAAGTTAGAC
AGTTTGGGTT TAGTAAAATG GCAGGGCAAT AAATACCATC CCAGATGTGA GTTATATCGT
CAATATTTTC AGGTTCATTT ATGA
|
|---|
| Protein sequence | MEKKSKRDRG RIITTSGLKK LNEAIEEWKQ KYNLRGTLAE IEAESGVGSD TISKIRQGRV
GADLSKIQQL FAAFDLTLDE TDYRSGKQSS SEMDSEPLSQ LLPLLNDEQI VTKNSFQIFI
SYNRQDPDQE LARQFETALA AAGHQVFMAG DHIRLGENWF RRINIELKRC DYLLLFLPPQ
SAQSELLTYQ VQLARELQFS RPERKPVILP IRVGFSLTQP LNHDLRGYLY RIQQREWRSP
EDTIIILKEV LTLLAAPPGN IALEIEEKKE ISLSEEISSI ASANFPPLPS AEPEIPGGQI
DVASNFYIER PPIEERCYQT ILQPSSLIRI KAPRQMGKTS LMARILHHAA FQGYRTIPLS
FQLVDKEVFS NLEKFLKWFC AYVGRELRLP NQLDDYWDDI FGSKVNCKDY FEKYLLAQID
HPLVLGLDEI DRVFQYPDIA EDFLGLLRAW HEESKRRAIW KKLRLLVVHS TEVYIPMNIN
QSPFNVGLPI DLPEFNLPQV KDLAFRHNLN WSEQEVEKLM AIIGGHPYLV RVALYHISKQ
DLTLEDLPEN VMSETGIYSD HLRRHLWNLE EYPELVAAMK NIISENLNER LTGILGFKLD
SLGLVKWQGN KYHPRCELYR QYFQVHL
|
|---|
| |