Gene Tery_4221 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_4221 
Symbol 
ID4245873 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp6512089 
End bp6513231 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content34% 
IMG OID638109117 
ProductPAS/PAC sensor signal transduction histidine kinase 
Protein accessionYP_723695 
Protein GI113477634 
COG category[T] Signal transduction mechanisms 
COG ID[COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGAAA TTTTCAAAGC AACTACTCAA TGTAATTTAA TTGATCATGT TCCCGTTGGC 
TTATGCCTAC TGCGAGAAGA TTTTGTTGTT CTATATTGGA ATCGTTGTCT AGAAAATTGG
ACAAAAATTT TTAGGGATGA CATCATAGGT AAAAATCTTT TAGACTTTTT CCCTCATCTC
AAACAACCCA AATATATAAG TCGTTTCCAG CAAGTTTTTT TCGGGGGATT TCCTGCTATT
TTTTCTCCTC AGTTGCACCC TTCTCTAATT CATTGTTTCC TACCGCATAA ACAAAAAGCG
ATTCAAAAAA CTATCGTTAA TGCTATTCCT ATTGAGGATA CCAATAATTA TTATGCTTTA
ATATGTATTC AGGATATTAC TGATTTTGAT TTAACAGATC GTATCCAAAG TTATCAAGAA
AAACTGAAAC AACGCCAATC AATACAAAGA GAACTAGAAC GTTCTAATGC TGAATTAGAA
AATTTTGCTT ACCTTGCTTC CCATGATTTG CAAGAACCCT TACGAATGGT TACGACTTTT
ACTCAAATGT TAGGCCAACG TTACAAAGAT CAATTAGATG AAGATGCCAA TCAAATTATT
GATTTTGCCG TAGATGGAGC TATCCGAATG CAGTCCCTGA TTAACGATTT ACTGTTATAC
TCAAGGGTTG GTAGACAATC CCAATTCTTT GAGCAAACTG ACTGTGAAGA AGTTTTAGAT
ACAGCATTAA GTAATCTTCA GTTGTTGATA GAAGAAACTA ATACCCATAT TTACCGAGAC
CCCTTACCTA CTATTATGGC GGATAAGTCC CAATTAATTC AACTATTTCA AAATATCCTC
AATAATGCGA TTAAGTATCG CAGGGAAGAA CCACCAAAAA TTGAAATAGG TGTTCGTTCA
GAGGATTACT ATTGTCTATT TTCGATTAAG GATAATGGTA TTGGTATTTC TAAACAATAT
TTTGAGCGAA TTTTTATGAT TTTTCAACGG CTACATACTA GGCAAGAATA CCCAGGAACA
GGCATTGGAT TAGCAATATG TCAAAAAATA ACTCAACGTC ATCAAGGAAA AATTTGGTTA
GAATCAGAAT TAGGAAAAGG TTCAACATTC TATTTTACTA TTCCTCAATA TGTGACAGAA
TAA
 
Protein sequence
MTEIFKATTQ CNLIDHVPVG LCLLREDFVV LYWNRCLENW TKIFRDDIIG KNLLDFFPHL 
KQPKYISRFQ QVFFGGFPAI FSPQLHPSLI HCFLPHKQKA IQKTIVNAIP IEDTNNYYAL
ICIQDITDFD LTDRIQSYQE KLKQRQSIQR ELERSNAELE NFAYLASHDL QEPLRMVTTF
TQMLGQRYKD QLDEDANQII DFAVDGAIRM QSLINDLLLY SRVGRQSQFF EQTDCEEVLD
TALSNLQLLI EETNTHIYRD PLPTIMADKS QLIQLFQNIL NNAIKYRREE PPKIEIGVRS
EDYYCLFSIK DNGIGISKQY FERIFMIFQR LHTRQEYPGT GIGLAICQKI TQRHQGKIWL
ESELGKGSTF YFTIPQYVTE