Gene Tery_4189 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_4189 
Symbol 
ID4245841 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp6455375 
End bp6457474 
Gene Length2100 bp 
Protein Length699 aa 
Translation table11 
GC content31% 
IMG OID638109088 
Productperiplasmic sensor signal transduction histidine kinase 
Protein accessionYP_723666 
Protein GI113477605 
COG category[T] Signal transduction mechanisms 
COG ID[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCACT TTTGGAAAAA AAGCCTCTTG ATCCAAATTG TAGGTTCTTT TTTAATATTG 
TCATTAATGA CAATATCAAT TGTCGGATAT ACAACTTTTA GTCAAGCACG AGCATCTTTA
AAAGAATCAG TGTTTGATCG CCTTAATTTT GCTGTAAAAC TTAAGGAAAA TGAACTTAAT
AATTGGATAT TAGATCAACG TAGAAATATT TTGGCGATCG CCGACTTGCC AGAAATTAAT
AACCAAGCAA AAATATTGTT AACAAGCCAA AAATCTACTC CAGAATATAA GTCAGCTCAA
ACTTTACTAT ATGCTTCTTT AAAATCTTTT GTCAGTAATC TTAATAACTT GCAAGAAATT
TTTATTTTAA GCAAAAGTAG TAGAATTTTA GTTTCGAGTA ATTCCAATAA AGTAGGAAAA
TATCAAGCCC TAACTCAATA TAGTCCAGTA ACAAGATCTC CCACATATAA GTTAAGATCA
AATCTTTACC GCAGTGCTGA AACAGATAAA CCCATAATTA CCTTTGCTAT TCCTATTCTT
AATGAAAATG GTAAACAATT AGGAATATTA GCTAGCCATC TTCGCCTAGA AAGAATTGAT
TCTATTATTA GAGAACAAGC AGGGTTAGGA CAAACAGCAA AAATATATTT AGTAGGTAAT
ATTGGTAATA GTTTTTCGAG GATAAATGTA TTTGTTTCAG CTACGGAATT TGGTTCAAAA
GAATTTCCTA ATGGTATTAG TAGTAAAGGT ATTAATGATG CTATTAATCA TAAAAATGGT
GAAGGGTTGT ATCGAAATTA CAAGGGTGTG CCAGTCATTG GTGTTTATCG GTGGCTAGAA
TATAAAGACT TAGCATTATT AGCAGAAATA GATCAAACAG AAGCATTTGC ATCTGCTCGT
CATCTTGCTA GTTCAATTTT GCTAGTTGGT TTGACATTAG CTTTAGTAAT GGCAGTAGCT
ATGTTGTTAT TAGGCCGTCA AATTGTACGG CCAATTTTAG CTATCGCTCA TACAGCTAGG
TTAGTAAGTA AAGGTGATCT AACTCAAAAA GTGCCAGTAT TAACTAAAAA CGAAATTGGT
TTGTTGGCTA AAACTTTTAA TGAAATGATT AAACAGCTAG AAAATTCATA TCAGGAACTA
TCTAATTATA ATCAAATTCT TGAGGTAAAA GTTAATGAAA GAACCCAAGA ATTAAAAGAA
AAAAATACAT ACCTAGAAAA AACACTTTTT AAGTTAAAAC AAACTCAATC TCAATTAATT
CAGGATGAAA AGATGGTAGC TTTAGGTCAA TTAGTTGCTG GGGTAGCTCA TGAAATTAAT
AACCCTATTA ACTTTATATA TGGCAATGTT AAACCCGCCA GAACTTATAC AAAAGATTTA
TTAGATTTAA TCAACCTTTA TCAGCAATAT TATCCAGAAC GGGCATCTGA AATTTTAGAA
ATAGAAACGA CAATAGACCT AGATTTTATA AGAGAAGATT TTCCTAGTTT GCTTGATTCT
ATGGAGGAAG GTTCTAGAAG AATTAAAGAG ATAGTTTTAT CCTTGCGTAA CTTTTCTCGC
CATGATCAAT CTAGCCAAAA ACAAGTTAAT ATTCACGAAG GTATAGATAG TACTCTACTA
ATTTTGCAAA ATCGCCTTAA ACCTAGGGTA GGATATCCAG AAATTCAGAT AATTAAAGAA
TATGGTAAGC TGCCATTGGT AGAATGTTTG GCTAGTCAAA TTAATCAAGT TTTTATGAAT
CTTTTTGCTA ATGGTATTGA TGCTTTAGAA ATGTCATGGG AAAAATCTAA ATCGAAGTTT
TTTTCTATTA AACCCCAGAT CATAATTAAG ACGAAAACTC TCAATAAAGA CTATATATCT
ATCCATATTA TTGATAATGG TCTAGGAATA CCAGAAAAAA ATAAAAATAG AATATTTGAA
CCCTTTTATA CAACAAAACC TGTAGGAAAA GGTACGGGTT TAGGATTATC CCTTAGTTAT
CAAATAATTG TGGAAAAACA TGGAGGTAAT TTTTACTGTA ATTCTTTGGT AAACGAAGGT
ACAGAATTTG TAATTGAATT GCCTATTTTG TATAAGTTCT CATCAATGAG TAAAAGTTAA
 
Protein sequence
MMHFWKKSLL IQIVGSFLIL SLMTISIVGY TTFSQARASL KESVFDRLNF AVKLKENELN 
NWILDQRRNI LAIADLPEIN NQAKILLTSQ KSTPEYKSAQ TLLYASLKSF VSNLNNLQEI
FILSKSSRIL VSSNSNKVGK YQALTQYSPV TRSPTYKLRS NLYRSAETDK PIITFAIPIL
NENGKQLGIL ASHLRLERID SIIREQAGLG QTAKIYLVGN IGNSFSRINV FVSATEFGSK
EFPNGISSKG INDAINHKNG EGLYRNYKGV PVIGVYRWLE YKDLALLAEI DQTEAFASAR
HLASSILLVG LTLALVMAVA MLLLGRQIVR PILAIAHTAR LVSKGDLTQK VPVLTKNEIG
LLAKTFNEMI KQLENSYQEL SNYNQILEVK VNERTQELKE KNTYLEKTLF KLKQTQSQLI
QDEKMVALGQ LVAGVAHEIN NPINFIYGNV KPARTYTKDL LDLINLYQQY YPERASEILE
IETTIDLDFI REDFPSLLDS MEEGSRRIKE IVLSLRNFSR HDQSSQKQVN IHEGIDSTLL
ILQNRLKPRV GYPEIQIIKE YGKLPLVECL ASQINQVFMN LFANGIDALE MSWEKSKSKF
FSIKPQIIIK TKTLNKDYIS IHIIDNGLGI PEKNKNRIFE PFYTTKPVGK GTGLGLSLSY
QIIVEKHGGN FYCNSLVNEG TEFVIELPIL YKFSSMSKS