Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_4181 |
Symbol | |
ID | 4245833 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | - |
Start bp | 6443191 |
End bp | 6444000 |
Gene Length | 810 bp |
Protein Length | 269 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 638109081 |
Product | SPFH domain-containing protein/band 7 family protein |
Protein accession | YP_723659 |
Protein GI | 113477598 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.967013 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCCAAT ATATTATTCC TGTGATAGCA ACCGCAATTG TTAGTTATAC AGTTAACTCC TCAGTAAAAG TTATTAGCCA AGGGGATGAA GCGTTAGTAG AACGCTTAGG TAAATATAGA CGTACTTTAA AGCCAGGACT TCAGTTTGTT GTACCCCTAG TAGAGAGAAT AACTTATGTT GATACAATTC GTGAACGAGT TTTGGATATT CCTGAGCAGT CAGTTATTAC TAATGATAAC TTGACTTTGA AAGTAGATGC AGTACTGTAC TGGCAGATCA TAGACATAGA GAGAGCGTAT TATGCAATTG AAAATGTAGA AAATGCTATT CAAGAAATTG TTTTAACTTC TCTGCGTTCT CAAATTGGTC GCTTGCCATT GCGACAAGTT TTGTCTACAA AAGATGATAT TGATAAAGCC TTGCTGAAAA AATTAGATGA AGCAACTTAT AACTGGGGGG TAAAAGTGAT TCGTGTTGAG ATTCAGAATA TTGTTTTTCC TGAAAAATTG CGAATAGCGA TGGAGTCGGA AAGAGTAGCT TTAAGTCAGA AGCAAACTGT TCTTTCTAAA GCTCAAGCAG AGGCAGAGTC TATCAAGCTT CTTTCTGAAA CTTTAAACTT GTCTCCAGAC AGTCCGGAAT TTATAAAATT TCTGATTGCT CAAAGATACA TAGAAATTAA TCATAAATTA AGTGAAAGTG CTAATTCTAA AGTAGTATTT ATGCACCCGA GGACTATGTC AGAAGGAGTG GGTGAATTAA TTGGAGAATA TCCTGATGAT GGTGAAATAG AACTAAAAAA AGTTGATTAA
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Protein sequence | MLQYIIPVIA TAIVSYTVNS SVKVISQGDE ALVERLGKYR RTLKPGLQFV VPLVERITYV DTIRERVLDI PEQSVITNDN LTLKVDAVLY WQIIDIERAY YAIENVENAI QEIVLTSLRS QIGRLPLRQV LSTKDDIDKA LLKKLDEATY NWGVKVIRVE IQNIVFPEKL RIAMESERVA LSQKQTVLSK AQAEAESIKL LSETLNLSPD SPEFIKFLIA QRYIEINHKL SESANSKVVF MHPRTMSEGV GELIGEYPDD GEIELKKVD
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