Gene Tery_4181 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_4181 
Symbol 
ID4245833 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp6443191 
End bp6444000 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content35% 
IMG OID638109081 
ProductSPFH domain-containing protein/band 7 family protein 
Protein accessionYP_723659 
Protein GI113477598 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0330] Membrane protease subunits, stomatin/prohibitin homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.967013 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCCAAT ATATTATTCC TGTGATAGCA ACCGCAATTG TTAGTTATAC AGTTAACTCC 
TCAGTAAAAG TTATTAGCCA AGGGGATGAA GCGTTAGTAG AACGCTTAGG TAAATATAGA
CGTACTTTAA AGCCAGGACT TCAGTTTGTT GTACCCCTAG TAGAGAGAAT AACTTATGTT
GATACAATTC GTGAACGAGT TTTGGATATT CCTGAGCAGT CAGTTATTAC TAATGATAAC
TTGACTTTGA AAGTAGATGC AGTACTGTAC TGGCAGATCA TAGACATAGA GAGAGCGTAT
TATGCAATTG AAAATGTAGA AAATGCTATT CAAGAAATTG TTTTAACTTC TCTGCGTTCT
CAAATTGGTC GCTTGCCATT GCGACAAGTT TTGTCTACAA AAGATGATAT TGATAAAGCC
TTGCTGAAAA AATTAGATGA AGCAACTTAT AACTGGGGGG TAAAAGTGAT TCGTGTTGAG
ATTCAGAATA TTGTTTTTCC TGAAAAATTG CGAATAGCGA TGGAGTCGGA AAGAGTAGCT
TTAAGTCAGA AGCAAACTGT TCTTTCTAAA GCTCAAGCAG AGGCAGAGTC TATCAAGCTT
CTTTCTGAAA CTTTAAACTT GTCTCCAGAC AGTCCGGAAT TTATAAAATT TCTGATTGCT
CAAAGATACA TAGAAATTAA TCATAAATTA AGTGAAAGTG CTAATTCTAA AGTAGTATTT
ATGCACCCGA GGACTATGTC AGAAGGAGTG GGTGAATTAA TTGGAGAATA TCCTGATGAT
GGTGAAATAG AACTAAAAAA AGTTGATTAA
 
Protein sequence
MLQYIIPVIA TAIVSYTVNS SVKVISQGDE ALVERLGKYR RTLKPGLQFV VPLVERITYV 
DTIRERVLDI PEQSVITNDN LTLKVDAVLY WQIIDIERAY YAIENVENAI QEIVLTSLRS
QIGRLPLRQV LSTKDDIDKA LLKKLDEATY NWGVKVIRVE IQNIVFPEKL RIAMESERVA
LSQKQTVLSK AQAEAESIKL LSETLNLSPD SPEFIKFLIA QRYIEINHKL SESANSKVVF
MHPRTMSEGV GELIGEYPDD GEIELKKVD