Gene Tery_4172 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_4172 
Symbol 
ID4245824 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp6434528 
End bp6435391 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content40% 
IMG OID638109073 
Productmethenyltetrahydrofolate cyclohydrolase 
Protein accessionYP_723651 
Protein GI113477590 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0190] 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.280923 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAAATA AATTAGATGG TAAAGCATTA GCCAAAAAAA TCAAAGCAGA ACTCCAACAA 
AAAGTTCAAT CTCTACAAAT CAAGATTGGC CGTCCTCCTG GTTTAGCAGT ATTAATGGTC
GGAGATAACC CTGCCAGTGG AGTGTATGTC CGCAACAAAG AAAAAGCTTG TACCCAAGTA
GGTATTACCT CCCTGGGAAA ACATTTTCCT ACCCAAACTT CTCAAGCTCA ACTAGGCCAA
GTTATTCAAA AATTAAACCA AGATCCACAA GTAGATGGTA TTCTTGTACA GTTACCCCTA
CCAAAACATT TAGACTCTAC TTCATTACTC TATCAAATTG ACCCTAGCAA AGACGTAGAT
GGACTCCATC CCATGAATCT TGGACAACTG CTCCGTGGTG AAAAGGGTTT ACGCAGTTGT
ACTCCCGCAG GAGTGATGCG TTTGCTACAA GAATATAAAA TTGAATTACA AGGAAAACAT
GCAGTTATAT TAGGGCGAAG TATTTTAGTA GGCAAACCAA TGGCGTTAAT GTTACTTGAG
GCTAATAGTA CAGTAACTAT TGCTCATTCC CGGTCTAAGA ACTTGGAAGC CATTACTAAA
AAAGCAGATA TTCTGATCAC TGCGGTAGGT AGACCAAAGA TGATTTCTGC TGAGATGGTC
AAACCAGGAG CAGTAGTAAT AGACGTAGGA ATTAACCGAG TTATAGATGA AGCGGGTAAT
AGTCAGTTAG TAGGAGATGT TCAATTTAAC TCTGTGGCAC AAGTTGCAGA ATATATTACA
CCTGTGCCTG GTGGAATAGG CCCGATGACC GTAGCAATGT TATTACAAAA TACTGTAGAA
CGTTGGAGTA CTTTAGTGGA ATAA
 
Protein sequence
MTNKLDGKAL AKKIKAELQQ KVQSLQIKIG RPPGLAVLMV GDNPASGVYV RNKEKACTQV 
GITSLGKHFP TQTSQAQLGQ VIQKLNQDPQ VDGILVQLPL PKHLDSTSLL YQIDPSKDVD
GLHPMNLGQL LRGEKGLRSC TPAGVMRLLQ EYKIELQGKH AVILGRSILV GKPMALMLLE
ANSTVTIAHS RSKNLEAITK KADILITAVG RPKMISAEMV KPGAVVIDVG INRVIDEAGN
SQLVGDVQFN SVAQVAEYIT PVPGGIGPMT VAMLLQNTVE RWSTLVE